RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
LTBR-209ENST00000541102 B3GAT2Q9NPZ5 323 aa12.38□□□□□ -0.43
LTBR-209ENST00000541102 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
LTBR-209ENST00000541102 OAZ3Q9UMX2 235 aa12.38□□□□□ -0.43
LTBR-209ENST00000541102 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 TEX13CA0A0J9YWL9 993 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 ARRDC5A6NEK1 342 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 MITFO75030 526 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 CD14P08571 375 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 HOXB1P14653 301 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 FMODQ06828 376 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 ANKDD1AQ495B1 522 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 MESTQ5EB52 335 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 ZNF544Q6NX49 715 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 FAHD1Q6P587 224 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 RASSF6Q6ZTQ3 369 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 MAGEE2Q8TD90 523 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 NMD3Q96D46 503 aaKnown RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 CENPNQ96H22 339 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 SLC25A44Q96H78 314 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 GPX7Q96SL4 187 aaPredicted RBP12.37□□□□□ -0.43
LTBR-209ENST00000541102 GRIP2Q9C0E4 1043 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 NRIP3Q9NQ35 241 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 POFUT2Q9Y2G5 429 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 IER3IP1Q9Y5U9 82 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 CDH10Q9Y6N8 788 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
LTBR-209ENST00000541102 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 VPS13CQ709C8 3753 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ZNF99A8MXY4 864 aaPredicted RBP12.36□□□□□ -0.43
LTBR-209ENST00000541102 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 RNF223E7ERA6 249 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 G3V2T6 193 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 SOCS2O14508 198 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 SSX4O60224 188 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 CRYAAP02489 173 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 CELA3BP08861 270 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 FCGR1AP12314 374 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ACADSP16219 412 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ZNF23P17027 643 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
LTBR-209ENST00000541102 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
LTBR-209ENST00000541102 IDH3GP51553 393 aaPredicted RBP12.36□□□□□ -0.43
LTBR-209ENST00000541102 ELF3P78545 371 aaPredicted RBP12.36□□□□□ -0.43
LTBR-209ENST00000541102 NPRL3Q12980 569 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 GK3PQ14409 553 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 HIST3H3Q16695 136 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 SLC36A3Q495N2 470 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 CD300LDQ6UXZ3 194 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 DPY19L2P2Q6ZN68 376 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 PTCHD4Q6ZW05 846 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 IQCF1Q8N6M8 205 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 MAPK1IP1LQ8NDC0 245 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ICA1LQ8NDH6 482 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 NOXO1Q8NFA2 376 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 OR4Q3Q8NH05 313 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 NRBF2Q96F24 287 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 LRR1Q96L50 414 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ULBP2Q9BZM5 246 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 SEC61A2Q9H9S3 476 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 IL20Q9NYY1 176 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ZFHX3Q15911 3703 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 NF1P21359 2839 aa12.36□□□□□ -0.43
LTBR-209ENST00000541102 ZNF503-AS2A6NEH8 195 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 FAM171A2A8MVW0 826 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 BHLHE40O14503 412 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 SLC2A10O95528 541 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 HLA-HP01893 362 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 QDPRP09417 244 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 CECR9P0C854 216 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 CBR1P16152 277 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 PAX7P23759 505 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 CDKN2AP42771 156 aaKnown RBP12.35□□□□□ -0.43
LTBR-209ENST00000541102 NAAAQ02083 359 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 PIGFQ07326 219 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 RAB35Q15286 201 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 ETFDHQ16134 617 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 SLC35F1Q5T1Q4 408 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 VHLLQ6RSH7 139 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 MDP1Q86V88 176 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 PQLC1Q8N2U9 271 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 ARIH2OSQ8N7S6 290 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 ATG16L2Q8NAA4 619 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 ZNF566Q969W8 418 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 ERMAPQ96PL5 475 aaPredicted RBP12.35□□□□□ -0.43
LTBR-209ENST00000541102 IFT27Q9BW83 186 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 TSSK6Q9BXA6 273 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 GABARAPL1Q9H0R8 117 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
LTBR-209ENST00000541102 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
LTBR-209ENST00000541102 CRNNQ9UBG3 495 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms