RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IGHV4-38-2P0DP08 117 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 ETS2P15036 469 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 CD80P33681 288 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 APLNRP35414 380 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 GUCY1A3Q02108 690 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM155Q4W5P6 130 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 HHATQ5VTY9 493 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC35D2Q76EJ3 337 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 JAZF1Q86VZ6 243 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 LRRC28Q86X40 367 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 KIRREL3Q8IZU9 778 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 PARP8Q8N3A8 854 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 OR5J2Q8NH18 312 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 BBS10Q8TAM1 723 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC25A44Q96H78 314 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 SORT1Q99523 831 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM27Q9HBJ8 222 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 A4GALTQ9NPC4 353 aa9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 EIF3KQ9UBQ5 218 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-209ENST00000539982 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 A0A0B4J2E0 115 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 A0A1B0GX12 115 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 WDR91A4D1P6 747 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 MGRN1O60291 552 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 ALX3O95076 343 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 MMP7P09237 267 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 NUDT7P0C024 238 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 CCNOP22674 350 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 STOMP27105 288 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 MPV17P39210 176 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 SLC1A6P48664 564 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 RAG2P55895 527 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 WDR4P57081 412 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 SEC61A1P61619 476 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 GNGT1P63211 74 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 RGNQ15493 299 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 OR1Q1Q15612 314 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 SPRNQ5BIV9 151 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM255AQ5JRV8 349 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 MBNL2Q5VZF2 373 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 BRICD5Q6PL45 260 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 UNQ6126/PRO20091Q6UXV3 157 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 COMTD1Q86VU5 262 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 C1orf174Q8IYL3 243 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 ZNF101Q8IZC7 436 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 BHLHE22Q8NFJ8 381 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 KLF14Q8TD94 323 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 DYDC1Q8WWB3 177 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 IPCEF1Q8WWN9 437 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 GEMIN6Q8WXD5 167 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 MAL2Q969L2 176 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 UBE2FQ969M7 185 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 VPS33AQ96AX1 596 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 PAIP2Q9BPZ3 127 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 RBM4BQ9BQ04 359 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM43Q9BTV4 400 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 PRDM13Q9H4Q3 707 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 TMEM106BQ9NUM4 274 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 DCAF16Q9NXF7 216 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 TAS2R5Q9NYW4 299 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 CGGBP1Q9UFW8 167 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 OR5V1Q9UGF6 321 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 IL20RAQ9UHF4 553 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 HAO1Q9UJM8 370 aa9.78□□□□□ -0.84
CLSTN3-209ENST00000539982 TANC2Q9HCD6 1990 aa9.77□□□□□ -0.84
CLSTN3-209ENST00000539982 SRRM5B3KS81 715 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 C5orf58C9J3I9 102 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 F5H0A9 414 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 BIRC5O15392 142 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 TPST1O60507 370 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 SLC22A3O75751 556 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 NDUFA7O95182 113 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 NGFP01138 241 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 PGA4P0DJD7 388 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 PGA3P0DJD8 388 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 BMP2P12643 396 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 TNFAIP6P98066 277 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 RELBQ01201 579 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 HSF2Q03933 536 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 HNRNPA0Q13151 305 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 HIST3H3Q16695 136 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 GTDC1Q4AE62 458 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ESCO2Q56NI9 601 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ZMAT1Q5H9K5 638 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 PABPC1L2AQ5JQF8 200 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 FAM205BPQ63HN1 556 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ASPHD2Q6ICH7 369 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 DHRS4L2Q6PKH6 230 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 LRRN1Q6UXK5 716 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 LRRC18Q8N456 261 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ZNF283Q8N7M2 679 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 HIPK4Q8NE63 616 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 SLC25A40Q8TBP6 338 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 MCHR2Q969V1 340 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 UPRTQ96BW1 309 aa9.77□□□□□ -0.85
CLSTN3-209ENST00000539982 ITCHQ96J02 903 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms