RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RP1P56715 2156 aa6.95□□□□□ -1.3
CCDC60-204ENST00000539847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 CPED1A4D0V7 1026 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 POM121BA6NF01 834 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 HSPB2A8KAH6 182 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GPR89AB7ZAQ6 455 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PRSS44E7EML9 344 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 CDC42EP2O14613 210 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DVL2O14641 736 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 XRCC3O43542 346 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 EIF4E2O60573 245 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 LEFTY1O75610 366 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 RBBP9O75884 186 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GLSO94925 669 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SNAPINO95295 136 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PMS2P2O95744 297 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 HEXAP06865 529 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DBIP07108 87 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ELFN1P0C7U0 828 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GPR89BP0CG08 455 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 F3P13726 295 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GLB1P16278 677 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 HIST1H1TP22492 207 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLC6A6P31641 620 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PYCR1P32322 319 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DIO1P49895 249 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 P2RX1P51575 399 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF136P52737 540 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PDX1P52945 283 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 CLDN2P57739 230 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 OR12D2P58182 307 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 KIAA1024LP59773 190 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 CSNK1G2P78368 415 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DCDP81605 110 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PRDX1Q06830 199 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 STX4Q12846 297 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 LASP1Q14847 261 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 HSPB2Q16082 182 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GUCA2BQ16661 112 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 NDUFAF6Q330K2 333 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM52BQ4KMG9 183 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DHRS7BQ6IAN0 325 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PWWP2BQ6NUJ5 590 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 RAB11FIP2Q7L804 512 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 VRK2Q86Y07 508 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 TRAPPC5Q8IUR0 188 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 GLB1L2Q8IW92 636 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SKA3Q8IX90 412 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLC35F3Q8IY50 421 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 EXD3Q8N9H8 876 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 C17orf47Q8NEP4 570 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 OR5K2Q8NHB8 316 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 COQ8AQ8NI60 647 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 FANK1Q8TC84 345 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 LGALS14Q8TCE9 139 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ADAMTS15Q8TE58 950 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 TFGQ92734 400 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLC35A4Q96G79 324 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF681Q96N22 645 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PSMG3-AS1Q96PY0 264 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 MNTQ99583 582 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLC25A21Q9BQT8 299 aaPredicted RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF559Q9BR84 538 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 RAB11FIP5Q9BXF6 653 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLC7A5P2Q9GIP4 190 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 MFFQ9GZY8 342 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ARL6Q9H0F7 186 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLITRK2Q9H156 845 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SLCO5A1Q9H2Y9 848 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 EXOSC3Q9NQT5 275 aaKnown RBP6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 NKIRAS2Q9NYR9 191 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 MBD2Q9UBB5 411 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 ZNF69Q9UC07 566 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 FLVCR2Q9UPI3 526 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 PLEKHA6Q9Y2H5 1048 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 MED31Q9Y3C7 131 aa6.94□□□□□ -1.3
CCDC60-204ENST00000539847 DOCK9Q9BZ29 2069 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 A0A1W2PR48 441 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TMEM200CA6NKL6 621 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CYSRT1A8MQ03 144 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 H3BUI4 141 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 RTCAO00442 366 aaKnown RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 IMPA2O14732 288 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ARPC3O15145 178 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 ATG12O94817 140 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TOXO94900 526 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 PAK4O96013 591 aaPredicted RBP6.93□□□□□ -1.3
CCDC60-204ENST00000539847 IGF2P01344 180 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 HRGP04196 525 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 TACSTD2P09758 323 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CD37P11049 281 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 LIPCP11150 499 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 PNLIPP16233 465 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CNR1P21554 472 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 NDUFS1P28331 727 aa6.93□□□□□ -1.3
CCDC60-204ENST00000539847 CSF2RBP32927 897 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms