RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MCHR2Q969V1 340 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
CD4-208ENST00000538827 TEAD3Q99594 435 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 MRPL13Q9BYD1 178 aaKnown RBP12.51□□□□□ -0.41
CD4-208ENST00000538827 GLRX2Q9NS18 164 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 PARPBPQ9NWS1 579 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 TINAGQ9UJW2 476 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
CD4-208ENST00000538827 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 SHANK1Q9Y566 2161 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 MBD3L4A6NDZ8 208 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 MBD3L3A6NE82 208 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 MBD3L5A6NJ08 208 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 CDK1P06493 297 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 EDNRAP25101 427 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 NTF4P34130 210 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 SLC15A1P46059 708 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 ZNF84P51523 738 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 CASP6P55212 293 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 ST3GAL4Q11206 333 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 RAB40BQ12829 278 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 POU4F2Q12837 409 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 HIST2H2BCQ6DN03 193 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 B3GNT6Q6ZMB0 384 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 ZBTB46Q86UZ6 589 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 POMGNT2Q8NAT1 580 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 ZNF511Q8NB15 262 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 OR10H4Q8NGA5 316 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 OR10H5Q8NGA6 315 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 MBD3L2Q8NHZ7 208 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 TMEM80Q96HE8 168 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 RBM24Q9BX46 236 aaKnown RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 MRPS26Q9BYN8 205 aaKnown RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 TTTY10Q9BZA0 68 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 SEC61A2Q9H9S3 476 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 ADGRL4Q9HBW9 690 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 FKBP14Q9NWM8 211 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 TAS2R16Q9NYV7 291 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 UPB1Q9UBR1 384 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 FOXD3Q9UJU5 478 aaPredicted RBP12.5□□□□□ -0.41
CD4-208ENST00000538827 POLR1DQ9Y2S0 133 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 LRBAP50851 2863 aa12.5□□□□□ -0.41
CD4-208ENST00000538827 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
CD4-208ENST00000538827 A0A087WXM4 84 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 TRGV8A0A0C4DH27 118 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 DHHO43323 396 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 SEC14L2O76054 403 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 SPARCP09486 303 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 MYL12AP19105 171 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 ROR2Q01974 943 aaKnown RBP12.49□□□□□ -0.41
CD4-208ENST00000538827 MVKQ03426 396 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 GLO1Q04760 184 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 GGTLC2Q14390 218 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 MEP1BQ16820 701 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 TSPO2Q5TGU0 170 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 ATCAYQ86WG3 371 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 GLB1L2Q8IW92 636 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 SLC35F2Q8IXU6 374 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 SVOPQ8N4V2 548 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 ST6GALNAC3Q8NDV1 305 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 SMAP2Q8WU79 429 aaPredicted RBP12.49□□□□□ -0.41
CD4-208ENST00000538827 HTRA1Q92743 480 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
CD4-208ENST00000538827 INTS14Q96SY0 518 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 DUSP21Q9H596 190 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 PRSS50Q9UI38 385 aa12.49□□□□□ -0.41
CD4-208ENST00000538827 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 MYL12BO14950 172 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 MPZL1O95297 269 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 IL2RAP01589 272 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 TFP02787 698 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 HTR1AP08908 422 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 HOXD4P09016 255 aaPredicted RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 SBK2P0C263 348 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 GAAP10253 952 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 ZNF823P16415 610 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 CDAP32320 146 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 MAP2K4P45985 399 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 BLVRAP53004 296 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 ACTC1P68032 377 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 ACTA1P68133 377 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 ADAM8P78325 824 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 C10orf128Q5T292 105 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 C9orf135Q5VTT2 229 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 VWA1Q6PCB0 445 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 SEM1Q6ZVN7 128 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 FAM214BQ7L5A3 538 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 OR6K3Q8NGY3 331 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 LINC00470Q9BZP3 86 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 GPR35Q9HC97 309 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms