RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 FCARP24071 287 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CARD18P57730 90 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CDC42EP1Q00587 391 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 FBXL22Q6P050 247 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 ARHGAP11AQ6P4F7 1023 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 BIVMQ86UB2 503 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 TMEM183AQ8IXX5 376 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 HLA-CQ95604 372 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 RCC1LQ96I51 464 aaKnown RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 MRGPRX3Q96LB0 322 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 GOLGA2P5Q9HBQ8 144 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 MYOTQ9UBF9 498 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CCNL1Q9UK58 526 aaPredicted RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 A0A1B0GW64 132 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 FOXE1O00358 373 aaPredicted RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OPN1LWP04000 364 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 DCNP07585 359 aaKnown RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 GALTP07902 379 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 TBPP20226 339 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 ELOBQ15370 118 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 RNF219Q5W0B1 726 aaPredicted RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 PRSS54Q6PEW0 395 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 GDPD4Q6W3E5 623 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 MBOAT2Q6ZWT7 520 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 COMMD6Q7Z4G1 85 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 ZDHHC22Q8N966 263 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 NAXEQ8NCW5 288 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OR52N4Q8NGI2 321 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OR8U1Q8NH10 309 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OR4C6Q8NH72 309 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OR5AK2Q8NH90 309 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 AUTS2Q8WXX7 1259 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 MYADMQ96S97 322 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 SMAD5Q99717 465 aaKnown RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 SLC17A5Q9NRA2 495 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 CRLS1Q9UJA2 301 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 FARSAQ9Y285 508 aaKnown RBP11.31□□□□□ -0.6
USP3-203ENST00000538686 AMDHD2Q9Y303 409 aa11.31□□□□□ -0.6
USP3-203ENST00000538686 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 IL18BPO95998 194 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 WNT11O96014 354 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 TK1P04183 234 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 NR2F1P10589 423 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 CLDN12P56749 244 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 RPS13P62277 151 aaKnown RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 RPS15P62841 145 aaKnown RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 ZNF774Q6NX45 483 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 FAM151BQ6UXP7 276 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 MTSS1LQ765P7 747 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 THOC6Q86W42 341 aaKnown RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 GKN2Q86XP6 184 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 KLHDC8AQ8IYD2 350 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 ZSCAN4Q8NAM6 433 aaPredicted RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 SEMA6DQ8NFY4 1073 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 GPX8Q8TED1 209 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 RGP1Q92546 391 aaPredicted RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 SLC41A3Q96GZ6 507 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 DPH1Q9BZG8 443 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 GPR62Q9BZJ7 368 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 OR8D2Q9GZM6 311 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
USP3-203ENST00000538686 PLEKHA2Q9HB19 425 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 SLC2A8Q9NY64 477 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 LRFN1Q9P244 771 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
USP3-203ENST00000538686 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 SRPX2O60687 465 aaPredicted RBP11.29□□□□□ -0.6
USP3-203ENST00000538686 CST4P01036 141 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
USP3-203ENST00000538686 APODP05090 189 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 EDNRAP25101 427 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 TACR3P29371 465 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 AFF3P51826 1226 aaKnown RBP11.29□□□□□ -0.6
USP3-203ENST00000538686 BACE1P56817 501 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 TAS2R38P59533 333 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 TAS2R50P59544 299 aa11.29□□□□□ -0.6
USP3-203ENST00000538686 RPS26P62854 115 aaKnown RBP11.29□□□□□ -0.6
USP3-203ENST00000538686 ARHGAP19Q14CB8 494 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms