RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 METTL7AQ9H8H3 244 aa4.37□□□□□ -1.71
CLIP1-207ENST00000536634 ACTR8Q9H981 624 aa4.37□□□□□ -1.71
CLIP1-207ENST00000536634 COPS7BQ9H9Q2 264 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-207ENST00000536634 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLIP1-207ENST00000536634 FBXO5Q9UKT4 447 aa4.37□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF490Q9ULM2 529 aaPredicted RBP4.37□□□□□ -1.71
CLIP1-207ENST00000536634 CLEC4AQ9UMR7 237 aa4.37□□□□□ -1.71
CLIP1-207ENST00000536634 DPRXA6NFQ7 191 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SNURFLB1AK76 121 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SAP18O00422 153 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 UGT2B11O75310 529 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CBR3O75828 277 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 AIFM1O95831 613 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 RHOXF2BP0C7M4 288 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 IRF2P14316 349 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SLC25A16P16260 332 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 USF1P22415 310 aaPredicted RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 HIST1H1TP22492 207 aaPredicted RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CPN2P22792 545 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SRD5A2P31213 254 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 GCKP35557 465 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CETN2P41208 172 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SLC6A8P48029 635 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 TMED10P49755 219 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 TNFRSF17Q02223 184 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 GUCY2DQ02846 1103 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 BSPH1Q075Z2 132 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 PON3Q15166 354 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF74Q16587 644 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 HSP90AA5PQ58FG0 334 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 FBXO48Q5FWF7 155 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 C1QTNF12Q5T7M4 302 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ANKRD22Q5VYY1 191 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 OR5M10Q6IEU7 315 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 C11orf71Q6IPW1 123 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SLC30A6Q6NXT4 461 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CASC4Q6P4E1 433 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 SCIMPQ6UWF3 145 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ZBTB49Q6ZSB9 765 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CENPVQ7Z7K6 275 aaPredicted RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ST13P4Q8IZP2 240 aaPredicted RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 RNF175Q8N4F7 328 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 C3orf56Q8N813 242 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF615Q8N8J6 731 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CCDC89Q8N998 374 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 TTLQ8NG68 377 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 OR5M1Q8NGP8 315 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 OR6S1Q8NH40 331 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 RIT1Q92963 219 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 OMA1Q96E52 524 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 RBM18Q96H35 190 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 FAM71F1Q96KD3 344 aaPredicted RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 MUS81Q96NY9 551 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 PAIP2Q9BPZ3 127 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 PINK1Q9BXM7 581 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 CACNG6Q9BXT2 260 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 NXF5Q9H1B4 397 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 RPF2Q9H7B2 306 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 IARS2Q9NSE4 1012 aaKnown RBP4.36□□□□□ -1.71
CLIP1-207ENST00000536634 KLRF1Q9NZS2 232 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 MAD1L1Q9Y6D9 718 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 TENM3Q9P273 2699 aa4.36□□□□□ -1.71
CLIP1-207ENST00000536634 ANKDD1BA6NHY2 528 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SDR42E2A6NKP2 422 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SHISA9B4DS77 424 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 EEDO75530 441 aaKnown RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GCM2O75603 506 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GPR75O95800 540 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 CCDC166P0CW27 439 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 TPSB2P20231 275 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 PSMB1P20618 241 aaKnown RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 HNF1AP20823 631 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GPX3P22352 226 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 PCGF2P35227 344 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SSR2P43308 183 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GTF2A1P52655 376 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 ACTG1P63261 375 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 RPP38P78345 283 aaKnown RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 HMGCS1Q01581 520 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SLAMF1Q13291 335 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 DOC2AQ14183 400 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GGTLC2Q14390 218 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 TPSAB1Q15661 275 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 TAB1Q15750 504 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 BCL2A1Q16548 175 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 NRF1Q16656 503 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 GPR139Q6DWJ6 353 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 CHMP1BQ7LBR1 199 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 CATSPERDQ86XM0 798 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 PLCZ1Q86YW0 608 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 VSTM4Q8IW00 320 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 BANPQ8N9N5 519 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 POMGNT2Q8NAT1 580 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 SLC37A3Q8NCC5 494 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 OR6K3Q8NGY3 331 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 OTUB1Q96FW1 271 aaPredicted RBP4.35□□□□□ -1.71
CLIP1-207ENST00000536634 VPS39Q96JC1 886 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 FEVQ99581 238 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 MS4A8Q9BY19 250 aa4.35□□□□□ -1.71
CLIP1-207ENST00000536634 NT5DC2Q9H857 520 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms