RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 LRRC20Q8TCA0 184 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 RORBQ92753 470 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM45BQ96B21 275 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 C3orf49Q96BT1 292 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF385AQ96PM9 386 aaKnown RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SF3B5Q9BWJ5 86 aaKnown RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 C1QTNF6Q9BXI9 259 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 KAT8Q9H7Z6 458 aaKnown RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SCPEP1Q9HB40 452 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 BCL2L10Q9HD36 194 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 A4GALTQ9NPC4 353 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC7A10Q9NS82 523 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 PARPBPQ9NWS1 579 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC25A37Q9NYZ2 338 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SLAMF8Q9P0V8 285 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 RPS6KB2Q9UBS0 482 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 USP22Q9UPT9 525 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC25A15Q9Y619 301 aa7.5□□□□□ -1.21
SFSWAP-202ENST00000535202 MTORP42345 2549 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 METTL15A6NJ78 407 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ELOA3DA6NLF2 546 aaPredicted RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 C12orf71A8MTZ7 269 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 TMEM229AB2RXF0 380 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SULT1B1O43704 296 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF780AO75290 641 aaPredicted RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SERPINI2O75830 405 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 KRT33AO76009 404 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 NPPAP01160 153 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 HTR1AP08908 422 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ARAFP10398 606 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ATP6V1B2P21281 511 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 PPIBP23284 216 aaKnown RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 PTAFRP25105 342 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 CD40P25942 277 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 HLA-DMAP28067 261 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 GTF2E2P29084 291 aaKnown RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 HTR2BP41595 481 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 GP2P55259 537 aaKnown RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 RAB25P57735 213 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 CSNK2BP67870 215 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 CDK6Q00534 326 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 TGFBR3Q03167 851 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 COX10Q12887 443 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ELOA3BQ3SY89 546 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 AGKQ53H12 422 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 LRIF1Q5T3J3 769 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 BLOC1S3Q6QNY0 202 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 KLHL24Q6TFL4 600 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 MSRB3Q8IXL7 192 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 C10orf111Q8N326 155 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SVOPLQ8N434 492 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 WDR31Q8NA23 367 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF555Q8NEP9 628 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 C1orf162Q8NEQ5 155 aaPredicted RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ELOA3Q8NG57 546 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 DNAJA4Q8WW22 397 aaPredicted RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 HTRA1Q92743 480 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC25A36Q96CQ1 311 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 RADILQ96JH8 1075 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 HS6ST2Q96MM7 605 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 MUS81Q96NY9 551 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 CENPOQ9BU64 300 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 PCDHAC1Q9H158 963 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SLCO5A1Q9H2Y9 848 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 SLC17A5Q9NRA2 495 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 ABCB10Q9NRK6 738 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 VAPAQ9P0L0 249 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 GLS2Q9UI32 602 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 GDF2Q9UK05 429 aaPredicted RBP7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 MGAT4BQ9UQ53 548 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 AMDHD2Q9Y303 409 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 CADP27708 2225 aa7.49□□□□□ -1.21
SFSWAP-202ENST00000535202 LEUTXA8MZ59 168 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 E7EQL1 145 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 RNF223E7ERA6 249 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 NDUFS7O75251 213 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 ZNF254O75437 659 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 CD8AP01732 235 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 ALPLP05186 524 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 S100A6P06703 90 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 PNMTP11086 282 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 MPGP29372 298 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 AQP1P29972 269 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 PRKAR1BP31321 381 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 ACVR1BP36896 505 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 SELENOPP49908 381 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 P2RY4P51582 365 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 LGALS3BPQ08380 585 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 SCARB2Q14108 478 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 ETFDHQ16134 617 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 HIKESHIQ53FT3 197 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 REEP3Q6NUK4 255 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 NIPAL3Q6P499 406 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 B3GLCTQ6Y288 498 aa7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 ABHD12BQ7Z5M8 362 aaPredicted RBP7.48□□□□□ -1.21
SFSWAP-202ENST00000535202 DTX2Q86UW9 622 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms