RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 A0A1W2PNR3 127 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 OR2M5A3KFT3 312 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 PMS2P1A4D2B8 440 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 OR4C45A6NMZ5 311 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 GPR171O14626 319 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 DVL2O14641 736 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 TRAF3IP2O43734 574 aaPredicted RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 ZIC3O60481 467 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 HPGDSO60760 199 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 RPP14O95059 124 aaKnown RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 TNFSF15O95150 251 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 SFTPDP35247 375 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 CLRN1P58418 232 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 H3F3AP84243 136 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 EIF2B1Q14232 305 aaKnown RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 PYDC2Q56P42 97 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 AGAP7PQ5VUJ5 663 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 BAIAP2L2Q6UXY1 529 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 ASB18Q6ZVZ8 466 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 RHOUQ7L0Q8 258 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 NR2C2APQ86WQ0 139 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 OR10H5Q8NGA6 315 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 TMEM185BQ9H7F4 350 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 PPP1R3EQ9H7J1 279 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 CYSLTR2Q9NS75 346 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 SLCO1C1Q9NYB5 712 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 ZNF726A6NNF4 738 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 FAM25AB3EWG3 89 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 FAM25CB3EWG5 89 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 FAM25GB3EWG6 89 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 PSMD9O00233 223 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 PGA4P0DJD7 388 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 PGA3P0DJD8 388 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 EPXP11678 715 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 NPR2P20594 1047 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 DCTDP32321 178 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 THBS2P35442 1172 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 AIMP2Q13155 320 aaKnown RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 GPAT4Q86UL3 456 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 OR5M1Q8NGP8 315 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 ADAMTS17Q8TE56 1095 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 THOC3Q96J01 351 aaKnown RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 FER1L6-AS2Q96M78 137 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 JSRP1Q96MG2 331 aaPredicted RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 PRRX2Q99811 253 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 TCF7L1Q9HCS4 588 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 NOX4Q9NPH5 578 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 BOKQ9UMX3 212 aaPredicted RBP11.97□□□□□ -0.49
BEST1-208ENST00000534553 TTC28Q96AY4 2481 aa11.97□□□□□ -0.49
BEST1-208ENST00000534553 HLA-DQB1P01920 261 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 SLC2A2P11168 524 aaPredicted RBP11.96□□□□□ -0.49
BEST1-208ENST00000534553 LAP3P28838 519 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 NR4A2P43354 598 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 SCAND1P57086 179 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 IL18Q14116 193 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 ETFDHQ16134 617 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 ZNF468Q5VIY5 522 aaPredicted RBP11.96□□□□□ -0.49
BEST1-208ENST00000534553 TRIQKQ629K1 86 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 LRRN1Q6UXK5 716 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 MDGA2Q7Z553 956 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 ZNF554Q86TJ5 538 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 TRMT10AQ8TBZ6 339 aaKnown RBP11.96□□□□□ -0.49
BEST1-208ENST00000534553 ADAMTS14Q8WXS8 1223 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 HSD17B8Q92506 261 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 PSMF1Q92530 271 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 TXNDC15Q96J42 360 aa11.96□□□□□ -0.49
BEST1-208ENST00000534553 SF3B5Q9BWJ5 86 aaKnown RBP11.96□□□□□ -0.49
BEST1-208ENST00000534553 WDFY4Q6ZS81 3184 aa11.96□□□□□ -0.5
BEST1-208ENST00000534553 AIPO00170 330 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 GPANK1O95872 356 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 CNR1P21554 472 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 CLDN6P56747 220 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 OC90Q02509 493 aaPredicted RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 ASAH1Q13510 395 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 HIST3H3Q16695 136 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 CEP78Q5JTW2 689 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 DCAF10Q5QP82 559 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 HACD4Q5VWC8 232 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 Q8N402 240 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 SAMD12Q8N8I0 201 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 RGP1Q92546 391 aaPredicted RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 PNPLA2Q96AD5 504 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 KCNJ15Q99712 375 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 CCDC86Q9H6F5 360 aaKnown RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 NIPAL2Q9H841 368 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 C14orf119Q9NWQ9 140 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 ETAA1Q9NY74 926 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 STMN3Q9NZ72 180 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 EXTL2Q9UBQ6 330 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 SPATA2Q9UM82 520 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms