RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 PSMA8Q8TAA3 256 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 PPP1R35Q8TAP8 253 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 PNPT1Q8TCS8 783 aaKnown RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 MOAP1Q96BY2 351 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 SLC25A36Q96CQ1 311 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 ZG16BQ96DA0 208 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 MTERF3Q96E29 417 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 FCRL1Q96LA6 429 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 WDFY2Q96P53 400 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 OXGR1Q96P68 337 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 CITED2Q99967 270 aaPredicted RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 MECRQ9BV79 373 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 SLC19A3Q9BZV2 496 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 RNF121Q9H920 327 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 RRAGDQ9NQL2 400 aaPredicted RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.31□□□□□ -1.56
CD44-237ENST00000534082 CLN8Q9UBY8 286 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 BAIAP2L1Q9UHR4 511 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 PPP1R3CQ9UQK1 317 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 FAM96BQ9Y3D0 163 aa5.31□□□□□ -1.56
CD44-237ENST00000534082 H3BS24 57 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 RAD51CO43502 376 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 NPIPB7O75200 414 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 ZFPL1O95159 310 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 ZNF205O95201 554 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 DUS4LO95620 317 aaKnown RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 TNFRSF1AP19438 455 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 MATN1P21941 496 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 TNFSF4P23510 183 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SLC6A2P23975 617 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 MAGEA12P43365 314 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 RPL38P63173 70 aaKnown RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 FUT5Q11128 374 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 COX10Q12887 443 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 EPS8Q12929 822 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 KCNMB1Q16558 191 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 GSTA3Q16772 222 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SMU1Q2TAY7 513 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 TEX35Q5T0J7 233 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 METTL11BQ5VVY1 283 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 LIPMQ5VYY2 423 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 MBNL2Q5VZF2 373 aaKnown RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 WDR25Q64LD2 544 aaPredicted RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 ZFAND6Q6FIF0 208 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 TMEM53Q6P2H8 277 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 ZNF662Q6ZS27 426 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 PTOV1Q86YD1 416 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 KLHL7Q8IXQ5 586 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 PDZD9Q8IXQ8 264 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 ZNF101Q8IZC7 436 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 CADM2Q8N3J6 435 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 OR7A2PQ8NGA2 310 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 OR1J2Q8NGS2 313 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 OR6N1Q8NGY5 312 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 OR5R1Q8NH85 324 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 MFSD8Q8NHS3 518 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 VANGL1Q8TAA9 524 aaPredicted RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 SLC25A40Q8TBP6 338 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 KLF14Q8TD94 323 aaPredicted RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 C10orf82Q8WW14 230 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 DPF1Q92782 380 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 ROPN1LQ96C74 230 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 METTL2AQ96IZ6 378 aaKnown RBP5.3□□□□□ -1.56
CD44-237ENST00000534082 CLPTM1LQ96KA5 538 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SLC35G5Q96KT7 338 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 LRR1Q96L50 414 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SAMD8Q96LT4 415 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 OSBPL9Q96SU4 736 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SH3GL3Q99963 347 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 TMEM246Q9BRR3 403 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 EMC6Q9BV81 110 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 PTDSS2Q9BVG9 487 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 WNT10AQ9GZT5 417 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 LRMDAQ9H2I8 198 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 MID1IP1Q9NPA3 183 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 POLE3Q9NRF9 147 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 C1orf109Q9NX04 203 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 SNX24Q9Y343 169 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 JRKLQ9Y4A0 524 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
CD44-237ENST00000534082 A0A096LPI6 279 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 RNF103-CHMP3A0A140T963 221 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 IQCMA0A1B0GVH7 501 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 AIM2O14862 343 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 TIMM8AO60220 97 aaPredicted RBP5.29□□□□□ -1.56
CD44-237ENST00000534082 ENTPD5O75356 428 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 CRCPO75575 148 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 PTHP01270 115 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 PF4P02776 101 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 GUSBP08236 651 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 PF4V1P10720 104 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 LAMP1P11279 417 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 TAC1P20366 129 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 CCNOP22674 350 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 PRPH2P23942 346 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 APLNRP35414 380 aa5.29□□□□□ -1.56
CD44-237ENST00000534082 WNT5AP41221 380 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms