RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 A0A0J9YY10 115 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RNASEK-C17orf49H0YIS7 233 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF264O43296 627 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SSX4O60224 188 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CTSEP14091 401 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HOXB3P14651 431 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 GJA1P17302 382 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RAB5AP20339 215 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GABRA3P34903 492 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CASRP41180 1078 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GRB2P62993 217 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 ROM1Q03395 351 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PLCXD2Q0VAA5 305 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FOXO1Q12778 655 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 KRBOX4Q5JUW0 171 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 MRPL2Q5T653 305 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 FIP1L1Q6UN15 594 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 C17orf107Q6ZR85 190 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC29A4Q7RTT9 530 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR51A2Q8NGJ7 313 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR9A4Q8NGU2 314 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SPSB1Q96BD6 273 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 MALSU1Q96EH3 234 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ELOVL3Q9HB03 270 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 YARS2Q9Y2Z4 477 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A10PA6NDY2 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A18PA6NE21 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A16PA6NEW6 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A20PA6NIJ5 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A8PA6NJQ4 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A7PA6NKC0 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A22PA8MWA6 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A12PA8MX19 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A23PA8MXZ1 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PPM1DO15297 605 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NUPL2O15504 423 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 TMPRSS11DO60235 418 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CTSVO60911 334 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FABP1P07148 127 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A13PP0C7W8 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A14PP0C7W9 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM90A24PP0C7X0 464 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ITGB8P26012 769 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LIM2P55344 173 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 BTG2P78543 158 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CATR1Q13166 79 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 DHRS2Q13268 280 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RAB31Q13636 194 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 EIF2B1Q14232 305 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 FAM74A3Q4VXF1 159 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 KIAA0895LQ68EN5 471 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 DPPA2Q7Z7J5 298 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CYB561A3Q8NBI2 242 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 UBAC2Q8NBM4 344 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR5T3Q8NGG3 340 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR2A1Q8NGT9 310 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ALG14Q96F25 216 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 BORCS8Q96FH0 119 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 WDR89Q96FK6 387 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC6A18Q96N87 628 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 AQP10Q96PS8 301 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ACTR3CQ9C0K3 210 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 PLK3Q9H4B4 646 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 IL21Q9HBE4 155 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC6A13Q9NSD5 602 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 CENPMQ9NSP4 180 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 INSL6Q9Y581 213 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 DLG5Q8TDM6 1919 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 A0A0A6YYD5 115 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 EIF1BO60739 113 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 DDAH2O95865 285 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HPP00738 406 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 HPXP02790 462 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 H2AFB1P0C5Y9 115 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR8G3PP0DMU2 310 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 FCARP24071 287 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 LAP3P28838 519 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ADH7P40394 386 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RAD52P43351 418 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF41P51814 821 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 CLDN6P56747 220 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 RPL27P61353 136 aaKnown RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SIM1P81133 766 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 MC1RQ01726 317 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 TLE2Q04725 743 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 COX20Q5RI15 118 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 ZNF648Q5T619 568 aaPredicted RBP3.7□□□□□ -1.82
SOX6-217ENST00000533870 SLC25A42Q86VD7 318 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NKAIN4Q8IVV8 208 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 SDR9C7Q8NEX9 313 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 OR52N5Q8NH56 324 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 NANPQ8TBE9 248 aa3.7□□□□□ -1.82
SOX6-217ENST00000533870 GRHL3Q8TE85 626 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms