RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 ACADSP16219 412 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 CFPP27918 469 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 DAP3P51398 398 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 MRPS34P82930 218 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 GUCY1A3Q02108 690 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 TEKQ02763 1124 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 PLP2Q04941 152 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 ARMC4Q5T2S8 1044 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 ACSM5Q6NUN0 579 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 C12orf54Q6X4T0 127 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 USP43Q70EL4 1123 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 LRRC18Q8N456 261 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 TEX29Q8N6K0 151 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 SYT14Q8NB59 555 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 PCYOX1LQ8NBM8 494 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 PFN4Q8NHR9 129 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 TMEM255BQ8WV15 326 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 LIPHQ8WWY8 451 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 POLR2J2Q9GZM3 115 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 POLR2J3Q9H1A7 115 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 NANOGQ9H9S0 305 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 SIAEQ9HAT2 523 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 SMURF2Q9HAU4 748 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 INIPQ9NRY2 104 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 C20orf141Q9NUB4 165 aa9.67□□□□□ -0.86
VPS28-214ENST00000531032 STX18Q9P2W9 335 aaKnown RBP9.67□□□□□ -0.86
VPS28-214ENST00000531032 OR5F1O95221 314 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 SLC2A10O95528 541 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 AVPP01185 164 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 MT-ND5P03915 603 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 FUT1P19526 365 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 STOMP27105 288 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 APLNRP35414 380 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 AQP2P41181 271 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 COMPP49747 757 aaPredicted RBP9.66□□□□□ -0.86
VPS28-214ENST00000531032 HILS1P60008 231 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 MVKQ03426 396 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 HSF2Q03933 536 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 KLF10Q13118 480 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 MOGQ16653 247 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 PABPC1L2AQ5JQF8 200 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 FAM209AQ5JX71 171 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 AVPI1Q5T686 147 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 FAHD2BQ6P2I3 314 aaPredicted RBP9.66□□□□□ -0.86
VPS28-214ENST00000531032 USP51Q70EK9 711 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 CALHM3Q86XJ0 350 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 NKAIN4Q8IVV8 208 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 ZNF101Q8IZC7 436 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 ICA1LQ8NDH6 482 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 OR1J1Q8NGS3 322 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 ZNF418Q8TF45 676 aaPredicted RBP9.66□□□□□ -0.86
VPS28-214ENST00000531032 RAB39BQ96DA2 213 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 SGTBQ96EQ0 304 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 FAHD2AQ96GK7 314 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 POM121L2Q96KW2 1035 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 ECSITQ9BQ95 431 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 SAP30LQ9HAJ7 183 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 GID8Q9NWU2 228 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 BAG5Q9UL15 447 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 SH3GLB1Q9Y371 365 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 WIPI2Q9Y4P8 454 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 UGT2A1Q9Y4X1 527 aa9.66□□□□□ -0.86
VPS28-214ENST00000531032 LOC105371242A0A075B767 164 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 IGKV1D-43A0A0B4J1Z2 117 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 A0A0G2JMP0 313 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 A0A0X1KG70 313 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 CLDN25C9JDP6 229 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 FXYD1O00168 92 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 FBP2O00757 339 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 PLPP2O43688 288 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 MPZL1O95297 269 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 IGHV2-5P01817 119 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 THRBP10828 461 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 ZNF32P17041 273 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 TNFRSF1BP20333 461 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 EPHA1P21709 976 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 DRD4P21917 467 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 CDAP32320 146 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 WNT5AP41221 380 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 ZNF81P51508 661 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 MMP15P51511 669 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 TAS2R41P59536 307 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 GLO1Q04760 184 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 PIN1Q13526 163 aaPredicted RBP9.65□□□□□ -0.86
VPS28-214ENST00000531032 HFEQ30201 348 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 RABL3Q5HYI8 236 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 COQ5Q5HYK3 327 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 TMEM255AQ5JRV8 349 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 MBNL2Q5VZF2 373 aaKnown RBP9.65□□□□□ -0.86
VPS28-214ENST00000531032 NANOGP8Q6NSW7 305 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 THSD4Q6ZMP0 1018 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 OR4M2Q8NGB6 313 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 OR8J3Q8NGG0 315 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 MOSPD2Q8NHP6 518 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 FAM216AQ8WUB2 273 aa9.65□□□□□ -0.86
VPS28-214ENST00000531032 TMEM239Q8WW34 195 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms