RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 DMRT3Q9NQL9 472 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ICAM5Q9UMF0 924 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 CSAG2Q9Y5P2 127 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TRBV23OR9-2A0A075B6M9 112 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 A0A0B4J2A0 478 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 GCGP01275 180 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 RPN2P04844 631 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ARG1P05089 322 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 IL9P15248 144 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SLBPQ14493 270 aaKnown RBP eCLIP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TMEM35AQ53FP2 167 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TMEM268Q5VZI3 342 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SLC22A25Q6T423 547 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 TMEM205Q6UW68 189 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 FRMD1Q8N878 549 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 OR2L8Q8NGY9 312 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 RRNAD1Q96FB5 475 aaKnown RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 PHB2Q99623 299 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 HIST1H2BLQ99880 126 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 ATG101Q9BSB4 218 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SRMSQ9H3Y6 488 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SHPKQ9UHJ6 478 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 CRLS1Q9UJA2 301 aa7.39□□□□□ -1.23
CSDE1-214ENST00000530886 NOP16Q9Y3C1 178 aaKnown RBP7.39□□□□□ -1.23
CSDE1-214ENST00000530886 SCN10AQ9Y5Y9 1956 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 A0A1W2PPK0 400 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 LNP1A1A4G5 178 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SMCO3A2RU48 225 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ARL5CA6NH57 179 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 M0R036 132 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 DOK2O60496 412 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ABLIM3O94929 683 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 HLA-AP01891 365 aaKnown RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 APODP05090 189 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 OR2T7P0C7T2 308 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 C6P13671 934 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 EPHA1P21709 976 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 GJA5P36382 358 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 DHPSP49366 369 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 NKX6-1P78426 367 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 DLK1P80370 383 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 LTBQ06643 244 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ATXN7L3Q14CW9 347 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 PIP5KL1Q5T9C9 394 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SLCO4C1Q6ZQN7 724 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 MEX3DQ86XN8 651 aaKnown RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 OR2T27Q8NH04 317 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 DCUN1D4Q92564 292 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 RAB8BQ92930 207 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 OR14J1Q9UGF5 321 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 YLPM1P49750 1951 aaKnown RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 CTAG2O75638 210 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 GAPDHP04406 335 aaKnown RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 NPSP0C0P6 89 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 OR5AC1P0C628 307 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SMIM10L2AP0DMW4 78 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SMIM10L2BP0DMW5 78 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ADCYAP1R1P41586 468 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 GPR3P46089 330 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 FXYD6P3P58550 94 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 GXYLT1Q4G148 440 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF658BQ4V348 819 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ABLIM2Q6H8Q1 611 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 PRSS54Q6PEW0 395 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SAMD7Q7Z3H4 446 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 PPP1R3BQ86XI6 285 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 OR6J1Q8NGC5 347 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 SNIP1Q8TAD8 396 aaKnown RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 RNF166Q96A37 237 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-214ENST00000530886 MRGPRX4Q96LA9 322 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ATG10Q9H0Y0 220 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 FBXO44Q9H4M3 255 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF281Q9Y2X9 895 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 UNC80Q8N2C7 3258 aa7.38□□□□□ -1.23
CSDE1-214ENST00000530886 PHOX2AO14813 284 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 TSPAN2O60636 221 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 CDC14BO60729 498 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 CYTIPO60759 359 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 THY1P04216 161 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 TACR2P21452 398 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 PRSS3P35030 304 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 GNALP38405 381 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 RBX1P62877 108 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 FUT5Q11128 374 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 ELOBQ15370 118 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 FBXW9Q5XUX1 488 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 GDF6Q6KF10 455 aaPredicted RBP7.37□□□□□ -1.23
CSDE1-214ENST00000530886 STAC2Q6ZMT1 411 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 RABEPKQ7Z6M1 372 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 ZNF283Q8N7M2 679 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 GAL3ST3Q96A11 431 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 OTUB2Q96DC9 234 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 MRGPRX3Q96LB0 322 aa7.37□□□□□ -1.23
CSDE1-214ENST00000530886 OR52D1Q9H346 318 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms