RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 CCDC126Q96EE4 140 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 SLC41A3Q96GZ6 507 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 TRNT1Q96Q11 434 aaKnown RBP11.14□□□□□ -0.63
SSRP1-203ENST00000526696 MIOXQ9UGB7 285 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 PPP1R3CQ9UQK1 317 aa11.14□□□□□ -0.63
SSRP1-203ENST00000526696 LOC100509620A0A075B734 347 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 EXOC1LA0A1B0GW35 172 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 TMEM233B4DJY2 109 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 ZNF879B4DU55 563 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 LYPLA1O75608 230 aaPredicted RBP11.13□□□□□ -0.63
SSRP1-203ENST00000526696 TOX4O94842 621 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 ABHD2P08910 425 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 CCNOP22674 350 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 CRHR1P34998 444 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 CSNK1A1P48729 337 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 COPZ1P61923 177 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 WHAMMP3Q1A5X7 153 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 PGS1Q32NB8 556 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 UGT3A2Q3SY77 523 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 MTX3Q5HYI7 312 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 FAM201AQ5SY85 155 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 FAM69AQ5T7M9 428 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 LRRC74BQ6ZQY2 392 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 SNX32Q86XE0 403 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 CLIP4Q8N3C7 705 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 OR4A15Q8NGL6 344 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
SSRP1-203ENST00000526696 ACMSDQ8TDX5 336 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 LHX4Q969G2 390 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 TMEM54Q969K7 222 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 RHOXF2Q9BQY4 288 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 DPY30Q9C005 99 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 MTHFD2LQ9H903 347 aaPredicted RBP11.13□□□□□ -0.63
SSRP1-203ENST00000526696 GCM1Q9NP62 436 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 ZNRD1Q9P1U0 126 aa11.13□□□□□ -0.63
SSRP1-203ENST00000526696 A0A087WUJ7 227 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 IQCMA0A1B0GVH7 501 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 ZNF726A6NNF4 738 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 RNASEK-C17orf49H0YIS7 233 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 ENSAO43768 121 aaKnown RBP11.12□□□□□ -0.63
SSRP1-203ENST00000526696 PEX11AO75192 247 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 CYB5R3P00387 301 aaPredicted RBP11.12□□□□□ -0.63
SSRP1-203ENST00000526696 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
SSRP1-203ENST00000526696 TNFRSF1AP19438 455 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 MAPK1P28482 360 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 GCAP28676 217 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 HOXC5Q00444 222 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 RUNDC3AQ59EK9 446 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 IL23RQ5VWK5 629 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 SERPINA11Q86U17 422 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 ANKRD46Q86W74 232 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 PDZD9Q8IXQ8 264 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
SSRP1-203ENST00000526696 OR2Z1Q8NG97 314 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 OR8B3Q8NGG8 313 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 POM121L2Q96KW2 1035 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 WDFY2Q96P53 400 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 OR8B2Q96RD0 313 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 SIRPDQ9H106 197 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 PPA2Q9H2U2 334 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 GLTPQ9NZD2 209 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 KLHL14Q9P2G3 628 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 CLN8Q9UBY8 286 aa11.12□□□□□ -0.63
SSRP1-203ENST00000526696 CGGBP1Q9UFW8 167 aaPredicted RBP11.12□□□□□ -0.63
SSRP1-203ENST00000526696 RNASET2O00584 256 aaKnown RBP11.11□□□□□ -0.63
SSRP1-203ENST00000526696 PTHP01270 115 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 CD28P10747 220 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 MYL2P10916 166 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
SSRP1-203ENST00000526696 PRPS1L1P21108 318 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 STOMP27105 288 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 ECHS1P30084 290 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 APLNRP35414 380 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 DNAJB13P59910 316 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 PSG7Q13046 419 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 GNA13Q14344 377 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 ZNF404Q494X3 552 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 PABPC1L2AQ5JQF8 200 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 CFAP157Q5JU67 520 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 SLC16A14Q7RTX9 510 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 TWIST2Q8WVJ9 160 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 C3orf30Q96M34 536 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 OR2V2Q96R30 315 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 SLC19A3Q9BZV2 496 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 IL19Q9UHD0 177 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 PRDM4Q9UKN5 801 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 FRAS1Q86XX4 4008 aa11.11□□□□□ -0.63
SSRP1-203ENST00000526696 MEGF11A6BM72 1044 aa11.1□□□□□ -0.63
SSRP1-203ENST00000526696 PHYHO14832 338 aa11.1□□□□□ -0.63
SSRP1-203ENST00000526696 OR2T1O43869 369 aa11.1□□□□□ -0.63
SSRP1-203ENST00000526696 TIMM8AO60220 97 aaPredicted RBP11.1□□□□□ -0.63
SSRP1-203ENST00000526696 SERPINI2O75830 405 aa11.1□□□□□ -0.63
SSRP1-203ENST00000526696 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
SSRP1-203ENST00000526696 BGLAPP02818 100 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms