RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 RAB40AQ8WXH6 277 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 C11orf40Q8WZ69 217 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 CDKL2Q92772 493 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 PMM1Q92871 262 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 DDIT4LQ96D03 193 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 R3HDM4Q96D70 268 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 ELMOD3Q96FG2 381 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 GPR78Q96P69 363 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF317Q96PQ6 595 aaPredicted RBP4.43□□□□□ -1.7
SF3B2-205ENST00000526653 B9D2Q9BPU9 175 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 SF3B5Q9BWJ5 86 aaKnown RBP4.43□□□□□ -1.7
SF3B2-205ENST00000526653 PRSS22Q9GZN4 317 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 IQCGQ9H095 443 aaKnown RBP4.43□□□□□ -1.7
SF3B2-205ENST00000526653 MMP28Q9H239 520 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 PIGUQ9H490 435 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 NANOGQ9H9S0 305 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 TMEM165Q9HC07 324 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 LZTFL1Q9NQ48 299 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 ADPRHL2Q9NX46 363 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 NKIRAS2Q9NYR9 191 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 OR5V1Q9UGF6 321 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 FOXJ3Q9UPW0 622 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 TMED7Q9Y3B3 224 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 POLR3HQ9Y535 204 aaPredicted RBP4.43□□□□□ -1.7
SF3B2-205ENST00000526653 TIMM22Q9Y584 194 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 NPTNQ9Y639 398 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 POMT1Q9Y6A1 747 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 PLXNB1O43157 2135 aa4.43□□□□□ -1.7
SF3B2-205ENST00000526653 KIR2DS1A0A191URI9 304 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 M0R3G1 203 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 SLC16A6O15403 523 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 BCAS1O75363 584 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 IGHV1-46P01743 117 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 WNT2P09544 360 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 PPIAL4GP0DN37 164 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 THRBP10828 461 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 HSD3B1P14060 373 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF14P17017 642 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 TYK2P29597 1187 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 HMOX2P30519 316 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 IER3P46695 156 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 CLDN17P56750 224 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 KLF3P57682 345 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 FGF12P61328 243 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 EMX1Q04741 257 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 SLC3A1Q07837 685 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF763Q0D2J5 394 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 PDE7AQ13946 482 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 RASA2Q15283 850 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 ESCO2Q56NI9 601 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 TTMPQ5BVD1 217 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 TEX35Q5T0J7 233 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 KLC3Q6P597 504 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 EIF3MQ7L2H7 374 aaKnown RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 GRINAQ7Z429 371 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 HMGN2P46Q86SG4 172 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 LRRC28Q86X40 367 aaPredicted RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 GPR137CQ8N3F9 429 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 CCDC126Q96EE4 140 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF75AQ96N20 296 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 MS4A4EQ96PG1 132 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 SDF2Q99470 211 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 PRPF18Q99633 342 aaKnown RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 LINC00470Q9BZP3 86 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 TRIM31Q9BZY9 425 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 ZCCHC3Q9NUD5 404 aaKnown RBP4.42□□□□□ -1.7
SF3B2-205ENST00000526653 SLCO1C1Q9NYB5 712 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 OSGIN1Q9UJX0 560 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 MKLN1Q9UL63 735 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 DSPPQ9NZW4 1301 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
SF3B2-205ENST00000526653 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 TCRBV9S1A1TA0A576 114 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SLC22A23A1A5C7 686 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 LIPT2A6NK58 231 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 FAM159BA6NKW6 160 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 AQP7P3A6NL99 342 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 STX16-NPEPL1H3BU86 382 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 RPL36A-HNRNPH2H7BZ11 118 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 STX16O14662 325 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SMIM24O75264 130 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 UGT2B17O75795 530 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 TSPAN9O75954 239 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 SUPT7LO94864 414 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 MT-ND5P03915 603 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 GPIP06744 558 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 CHRM4P08173 479 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 ZNF250P15622 560 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 TACR3P29371 465 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 GABRA5P31644 462 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 PGM1P36871 562 aa4.41□□□□□ -1.7
SF3B2-205ENST00000526653 CCT3P49368 545 aaKnown RBP4.41□□□□□ -1.7
SF3B2-205ENST00000526653 MAP2K6P52564 334 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms