RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 RPL27P61353 136 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 INSM1Q01101 510 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 GUCA2AQ02747 115 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ZP2Q05996 745 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ELAVL1Q15717 326 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 RAB11BQ15907 218 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 AANATQ16613 207 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 C2orf76Q3KRA6 126 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 YOD1Q5VVQ6 348 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 ASPHD2Q6ICH7 369 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 C9orf40Q8IXQ3 194 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 OR4D10Q8NGI6 311 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 FAM3DQ96BQ1 224 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 KCNK15Q9H427 330 aa9.99□□□□□ -0.81
HDAC9-228ENST00000524023 MRPL22Q9NWU5 206 aaKnown RBP9.99□□□□□ -0.81
HDAC9-228ENST00000524023 TRAV18A0A075B6X5 111 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 IGLV1-36A0A0B4J1U3 117 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 A0A1W2PPL8 197 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TUBAL3A6NHL2 446 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TTLL8A6PVC2 850 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 C2CD4DB7Z1M9 353 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 MCRIP1C9JLW8 97 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SLC17A2O00624 439 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SLC16A7O60669 478 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 RAD1O60671 282 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SNAPC5O75971 98 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 KDM4BO94953 1096 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 PNPP00491 289 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 DLX5P56178 289 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 HLA-DQA1Q5Y7H0 255 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 FAM166AQ6J272 317 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SLC18B1Q6NT16 456 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 IDO2Q6ZQW0 420 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-228ENST00000524023 BPHLQ86WA6 291 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-228ENST00000524023 C17orf82Q86X59 251 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-228ENST00000524023 OR6N1Q8NGY5 312 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 LRRC20Q8TCA0 184 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 PPP1R14AQ96A00 147 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 C8orf44Q96CB5 159 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TBL1XR1Q9BZK7 514 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TXNIPQ9H3M7 391 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 VSX1Q9NZR4 365 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-228ENST00000524023 DHCR7Q9UBM7 475 aaKnown RBP9.98□□□□□ -0.81
HDAC9-228ENST00000524023 FREM3P0C091 2139 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TMED7-TICAM2A0A0A6YYA0 188 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 ARPC4-TTLL3A0A0A6YYG9 625 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 LOC100289279A0A1B0GTE1 492 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TCRBV16S1A1N1A0A5B0 115 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 UBE2QL1A1L167 161 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 OR6C65A6NJZ3 312 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SUSD5O60279 629 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 NPIPB7O75200 414 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 OR6A2O95222 327 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 RLN1P04808 185 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SPARCP09486 303 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 AKAIN1P0CW23 69 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 GTF2F2P13984 249 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 CTLA4P16410 223 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 PRSS3P35030 304 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 ROM1Q03395 351 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 PLCXD2Q0VAA5 305 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 ETFDHQ16134 617 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 C2orf68Q2NKX9 166 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 NHLRC3Q5JS37 347 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 FAM198BQ6UWH4 519 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 C3P1Q6ZMU1 363 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 DEFB119Q8N690 84 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 PNPLA2Q96AD5 504 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 ZDHHC12Q96GR4 267 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 SLC17A5Q9NRA2 495 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 GTF2A1LQ9UNN4 478 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TMED7Q9Y3B3 224 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 MYO15AQ9UKN7 3530 aa9.98□□□□□ -0.81
HDAC9-228ENST00000524023 TMEM272A0A1B0GTI8 110 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 TO15178 435 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 SIX6O95475 246 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 GLULP15104 373 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 CD38P28907 300 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 POLR2HP52434 150 aaKnown RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 H2BFSP57053 126 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 MFGE8Q08431 387 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 KIF26BQ2KJY2 2108 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 PRAMEF17Q5VTA0 474 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 KCTD18Q6PI47 426 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-228ENST00000524023 NDUFAF7Q7L592 441 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 HDDC2Q7Z4H3 204 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 KRT77Q7Z794 578 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ADGRG3Q86Y34 549 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 PLPP7Q8NBV4 271 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OR51S1Q8NGJ8 323 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OR5M1Q8NGP8 315 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 ASB5Q8WWX0 329 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 OMA1Q96E52 524 aa9.97□□□□□ -0.81
HDAC9-228ENST00000524023 MVB12AQ96EY5 273 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms