RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 NT5MQ9NPB1 228 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 EXD2Q9NVH0 621 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 SLC25A37Q9NYZ2 338 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 SPATA7Q9P0W8 599 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 TRAPPC4Q9Y296 219 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 PRXQ9BXM0 1461 aa2.43□□□□□ -2.02
PCM1-220ENST00000523896 KIAA1551Q9HCM1 1747 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 ZFHX4Q86UP3 3567 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 RGPD8O14715 1765 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 SCN11AQ9UI33 1791 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 CDC42BPGQ6DT37 1551 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 CCNB3Q8WWL7 1395 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 IGLV3-22A0A075B6J6 115 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 A0A0U1RQS6 177 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 FOXE1O00358 373 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 PES1O00541 588 aaKnown RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 PEX7O00628 323 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 UPK3AO75631 287 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 IGHV2-5P01817 119 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 GAPDHP04406 335 aaKnown RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 ALDOBP05062 364 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 PNMA6AP0CW24 399 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 TCN1P20061 433 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 SLC26A3P40879 764 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 DDX39BQ13838 428 aaKnown RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 GK3PQ14409 553 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 RFX4Q33E94 735 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 AGBL2Q5U5Z8 902 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 TRIM40Q6P9F5 258 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 LRRC31Q6UY01 552 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 ZNF621Q6ZSS3 439 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 FAM43BQ6ZT52 329 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 SLC25A48Q6ZT89 311 aaKnown RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 C6orf120Q7Z4R8 191 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 PSTKQ8IV42 348 aaKnown RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 ZADH2Q8N4Q0 377 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 ZNF557Q8N988 423 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 OR2G3Q8NGZ4 309 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 DTX3LQ8TDB6 740 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 MCOLN3Q8TDD5 553 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 SHC3Q92529 594 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 FAM104AQ969W3 186 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 PLEKHA8Q96JA3 519 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 MS4A4EQ96PG1 132 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 GCOM2Q9BZD3 368 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 DMAP1Q9NPF5 467 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 ADAP2Q9NPF8 381 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 STOX2Q9P2F5 926 aaPredicted RBP2.42□□□□□ -2.02
PCM1-220ENST00000523896 SUN2Q9UH99 717 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 FAM208BQ5VWN6 2430 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 CRB1P82279 1406 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 CDHR2Q9BYE9 1310 aa2.42□□□□□ -2.02
PCM1-220ENST00000523896 ZNF462Q96JM2 2506 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 MBD5Q9P267 1494 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 PPIAL4EA0A075B759 164 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 SYNJ2BP-COX16A0A087WUM0 186 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 LAD1O00515 517 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 MGRN1O60291 552 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 C1orf105O95561 183 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 TMEM50AO95807 157 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 C2P06681 752 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 CSF3P09919 207 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 GKN3PP0CG01 181 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 PPIAL4FP0DN26 164 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 ADRB3P13945 408 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 RPS2P15880 293 aaKnown RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 GPR6P46095 362 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 CRISP3P54108 245 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 FGF8P55075 233 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 PPIL2Q13356 520 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 SGCAQ16586 387 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 PIGGQ5H8A4 983 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 CST9Q5W186 159 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 LRRC74BQ6ZQY2 392 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 NBPF5PQ86XG9 351 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 TMEM158Q8WZ71 300 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 SORT1Q99523 831 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 CDX2Q99626 313 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 KCTD14Q9BQ13 255 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 ECSITQ9BQ95 431 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 CLMPQ9H6B4 373 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 ZNF226Q9NYT6 803 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 GNPTGQ9UJJ9 305 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 RAB26Q9ULW5 256 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 ASH1LQ9NR48 2969 aaKnown RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 GCN1Q92616 2671 aaKnown RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 KDM6AO15550 1401 aaPredicted RBP2.41□□□□□ -2.02
PCM1-220ENST00000523896 USP54Q70EL1 1684 aa2.41□□□□□ -2.02
PCM1-220ENST00000523896 DICER1Q9UPY3 1922 aaKnown RBP2.4□□□□□ -2.02
PCM1-220ENST00000523896 CCDC141Q6ZP82 1450 aa2.4□□□□□ -2.02
PCM1-220ENST00000523896 ACACBO00763 2458 aa2.4□□□□□ -2.03
PCM1-220ENST00000523896 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.4□□□□□ -2.03
PCM1-220ENST00000523896 ARHGEF35A5YM69 484 aa2.4□□□□□ -2.03
PCM1-220ENST00000523896 ERVV-1B6SEH8 477 aa2.4□□□□□ -2.03
PCM1-220ENST00000523896 CCL21O00585 134 aa2.4□□□□□ -2.03
PCM1-220ENST00000523896 UBTFL1P0CB47 393 aaPredicted RBP2.4□□□□□ -2.03
PCM1-220ENST00000523896 IGHV3-43DP0DP04 118 aa2.4□□□□□ -2.03
PCM1-220ENST00000523896 NCF2P19878 526 aaPredicted RBP2.4□□□□□ -2.03
PCM1-220ENST00000523896 TAGLN2P37802 199 aaKnown RBP2.4□□□□□ -2.03
PCM1-220ENST00000523896 CRYBB2P43320 205 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms