RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 BET1O15155 118 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DENRO43583 198 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TIMM8AO60220 97 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 PRAF2O60831 178 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 GMNNO75496 209 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 BANF1O75531 89 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 BRI3O95415 125 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 PSMG1O95456 288 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SERPINE1P05121 402 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 FABP1P07148 127 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 CTXN2P0C2S0 81 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DANCRP0C864 163 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TMEM225BP0DP42 221 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 FEN1P39748 380 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 MAGEA3P43357 314 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 KPNA2P52292 529 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 RAP1GDS1P52306 607 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 AQP5P55064 265 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 MAT1AQ00266 395 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 MYBPC1Q00872 1141 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 CHI3L2Q15782 390 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 PSG3Q16557 428 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TATDN3Q17R31 274 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TMEM249Q2WGJ8 235 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TRMT5Q32P41 509 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 KLHL22Q53GT1 634 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 AWAT1Q58HT5 328 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 C6orf10Q5SRN2 563 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 FAM120AOSQ5T036 256 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 LRRC8EQ6NSJ5 796 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 BTNL8Q6UX41 500 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 FAM151BQ6UXP7 276 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 LRRC74BQ6ZQY2 392 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SHISA6Q6ZSJ9 500 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 Q6ZWC4 215 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SNX20Q7Z614 316 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SETD3Q86TU7 594 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 GGNQ86UU5 652 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 IGFN1Q86VF2 1251 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 ZC3HC1Q86WB0 502 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 RFLNBQ8N5W9 214 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 ATP6V0D2Q8N8Y2 350 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 BOLLQ8N9W6 283 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 C19orf18Q8NEA5 215 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 RDH11Q8TC12 318 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 M1APQ8TC57 530 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DTD1Q8TEA8 209 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DNAJC9Q8WXX5 260 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SMPDL3BQ92485 455 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 HSD17B8Q92506 261 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 PIGCQ92535 297 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 RNASE6Q93091 150 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 NTAN1Q96AB6 310 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 C8orf44Q96CB5 159 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 CTHRC1Q96CG8 243 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 COX14Q96I36 57 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DOCK7Q96N67 2140 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 OPALINQ96PE5 141 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 VPS35Q96QK1 796 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 NDNQ99608 321 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 C7orf50Q9BRJ6 194 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 ST6GALNAC5Q9BVH7 336 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 CADM1Q9BY67 442 aaKnown RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 SLC39A8Q9C0K1 460 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 OR2B2Q9GZK3 357 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 WWTR1Q9GZV5 400 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 RANBP3Q9H6Z4 567 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TRIM45Q9H8W5 580 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 ELOVL3Q9HB03 270 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 CHMP1AQ9HD42 196 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 DUSP22Q9NRW4 184 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 C20orf96Q9NUD7 363 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-223ENST00000523636 NDE1Q9NXR1 346 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 TAS2R1Q9NYW7 299 aa4.5□□□□□ -1.69
PABPC1-223ENST00000523636 IGLV3-10A0A075B6K4 115 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 A0A1B0GW15 77 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 A0A1W2PPQ1 181 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 FABP12A6NFH5 140 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 SERPINE3A8MV23 424 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 DEFB108AA8MXU0 73 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 FAM157AC9JC47 383 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 NPIPA2E9PIF3 369 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 KLRC4-KLRK1H3BQV0 150 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 NDUFA2O43678 99 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 PLIN3O60664 434 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 SUPT3HO75486 399 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 ANXA9O76027 345 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 HPP00738 406 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 CST1P01037 141 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 IFNA6P05013 189 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 OR4E1P0C645 316 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 OR2T7P0C7T2 308 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 ELFN1P0C7U0 828 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 GSTT2P0CG29 244 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 GSTT2BP0CG30 244 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 PSKH1P11801 424 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 CPN1P15169 458 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 NCK1P16333 377 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 NDUFB7P17568 137 aa4.49□□□□□ -1.69
PABPC1-223ENST00000523636 LOXP28300 417 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms