RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CEP55Q53EZ4 464 aa2.56□□□□□ -2
PCM1-219ENST00000523540 PRAMEF5Q5TYX0 476 aa2.56□□□□□ -2
PCM1-219ENST00000523540 PRAMEF6Q5VXH4 476 aa2.56□□□□□ -2
PCM1-219ENST00000523540 KDELC1Q6UW63 502 aa2.56□□□□□ -2
PCM1-219ENST00000523540 ZNF836Q6ZNA1 936 aa2.56□□□□□ -2
PCM1-219ENST00000523540 NOXO1Q8NFA2 376 aa2.56□□□□□ -2
PCM1-219ENST00000523540 RHEBL1Q8TAI7 183 aa2.56□□□□□ -2
PCM1-219ENST00000523540 ZNF606Q8WXB4 792 aa2.56□□□□□ -2
PCM1-219ENST00000523540 DEDD2Q8WXF8 326 aa2.56□□□□□ -2
PCM1-219ENST00000523540 CREB3L1Q96BA8 519 aa2.56□□□□□ -2
PCM1-219ENST00000523540 FAM3DQ96BQ1 224 aa2.56□□□□□ -2
PCM1-219ENST00000523540 KLHL28Q9NXS3 571 aa2.56□□□□□ -2
PCM1-219ENST00000523540 COX16Q9P0S2 106 aa2.56□□□□□ -2
PCM1-219ENST00000523540 ZNF835Q9Y2P0 537 aa2.56□□□□□ -2
PCM1-219ENST00000523540 F6UB75 175 aa2.55□□□□□ -2
PCM1-219ENST00000523540 GABARAPO95166 117 aa2.55□□□□□ -2
PCM1-219ENST00000523540 RAB3DO95716 219 aa2.55□□□□□ -2
PCM1-219ENST00000523540 AIFM1O95831 613 aa2.55□□□□□ -2
PCM1-219ENST00000523540 FABP3P05413 133 aa2.55□□□□□ -2
PCM1-219ENST00000523540 ZNF286BP0CG31 522 aa2.55□□□□□ -2
PCM1-219ENST00000523540 IGHV1-8P0DP01 117 aa2.55□□□□□ -2
PCM1-219ENST00000523540 SLC2A3P11169 496 aa2.55□□□□□ -2
PCM1-219ENST00000523540 MUC1P15941 1255 aaPredicted RBP2.55□□□□□ -2
PCM1-219ENST00000523540 ZNF43P17038 809 aa2.55□□□□□ -2
PCM1-219ENST00000523540 HNRNPH3P31942 346 aaKnown RBP2.55□□□□□ -2
PCM1-219ENST00000523540 NUP214P35658 2090 aaPredicted RBP2.55□□□□□ -2
PCM1-219ENST00000523540 NAMPTP43490 491 aa2.55□□□□□ -2
PCM1-219ENST00000523540 CSNK1A1P48729 337 aa2.55□□□□□ -2
PCM1-219ENST00000523540 CNTNAP1P78357 1384 aa2.55□□□□□ -2
PCM1-219ENST00000523540 SYCNQ0VAF6 134 aa2.55□□□□□ -2
PCM1-219ENST00000523540 CLINT1Q14677 625 aa2.55□□□□□ -2
PCM1-219ENST00000523540 TGFBIQ15582 683 aa2.55□□□□□ -2
PCM1-219ENST00000523540 LY6EQ16553 131 aa2.55□□□□□ -2
PCM1-219ENST00000523540 DNAJC24Q6P3W2 148 aa2.55□□□□□ -2
PCM1-219ENST00000523540 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
PCM1-219ENST00000523540 Q6ZSR3 168 aa2.55□□□□□ -2
PCM1-219ENST00000523540 UBALD2Q8IYN6 164 aa2.55□□□□□ -2
PCM1-219ENST00000523540 UBE2J2Q8N2K1 259 aa2.55□□□□□ -2
PCM1-219ENST00000523540 PDXPQ96GD0 296 aa2.55□□□□□ -2
PCM1-219ENST00000523540 C12orf10Q9HB07 376 aa2.55□□□□□ -2
PCM1-219ENST00000523540 ZNF355PQ9NSJ1 428 aa2.55□□□□□ -2
PCM1-219ENST00000523540 CSDC2Q9Y534 153 aaKnown RBP2.55□□□□□ -2
PCM1-219ENST00000523540 PPP1R2P9O14990 202 aa2.54□□□□□ -2
PCM1-219ENST00000523540 RP2O75695 350 aa2.54□□□□□ -2
PCM1-219ENST00000523540 NDUFB10O96000 172 aa2.54□□□□□ -2
PCM1-219ENST00000523540 BCHEP06276 602 aa2.54□□□□□ -2
PCM1-219ENST00000523540 CALM1P0DP23 149 aa2.54□□□□□ -2
PCM1-219ENST00000523540 CALM2P0DP24 149 aa2.54□□□□□ -2
PCM1-219ENST00000523540 CALM3P0DP25 149 aa2.54□□□□□ -2
PCM1-219ENST00000523540 NCF2P19878 526 aaPredicted RBP2.54□□□□□ -2
PCM1-219ENST00000523540 SSR4P51571 173 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ZNF138P52744 262 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ECH1Q13011 328 aa2.54□□□□□ -2
PCM1-219ENST00000523540 DDX39BQ13838 428 aaKnown RBP2.54□□□□□ -2
PCM1-219ENST00000523540 GINS1Q14691 196 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ZSCAN26Q16670 478 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ANKRD22Q5VYY1 191 aa2.54□□□□□ -2
PCM1-219ENST00000523540 NIPA1Q7RTP0 329 aa2.54□□□□□ -2
PCM1-219ENST00000523540 MMAAQ8IVH4 418 aaKnown RBP2.54□□□□□ -2
PCM1-219ENST00000523540 PDIK1LQ8N165 341 aa2.54□□□□□ -2
PCM1-219ENST00000523540 EID2Q8N6I1 236 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ZNF709Q8N972 641 aa2.54□□□□□ -2
PCM1-219ENST00000523540 OR9K2Q8NGE7 335 aa2.54□□□□□ -2
PCM1-219ENST00000523540 CXorf40AQ8TE69 158 aa2.54□□□□□ -2
PCM1-219ENST00000523540 FBXO32Q969P5 355 aa2.54□□□□□ -2
PCM1-219ENST00000523540 ZNF681Q96N22 645 aa2.54□□□□□ -2
PCM1-219ENST00000523540 UBE2ZQ9H832 354 aaPredicted RBP2.54□□□□□ -2
PCM1-219ENST00000523540 METTL7AQ9H8H3 244 aa2.54□□□□□ -2
PCM1-219ENST00000523540 SIRT7Q9NRC8 400 aa2.54□□□□□ -2
PCM1-219ENST00000523540 PISDQ9UG56 409 aa2.54□□□□□ -2
PCM1-219ENST00000523540 NUP50Q9UKX7 468 aa2.54□□□□□ -2
PCM1-219ENST00000523540 COLCA2A8K830 154 aa2.53□□□□□ -2
PCM1-219ENST00000523540 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
PCM1-219ENST00000523540 MAS1LP35410 378 aa2.53□□□□□ -2
PCM1-219ENST00000523540 CEACAM6P40199 344 aa2.53□□□□□ -2
PCM1-219ENST00000523540 AQP2P41181 271 aa2.53□□□□□ -2
PCM1-219ENST00000523540 YWHAGP61981 247 aaKnown RBP eCLIP2.53□□□□□ -2
PCM1-219ENST00000523540 ACTG2P63267 376 aa2.53□□□□□ -2
PCM1-219ENST00000523540 TCP10Q12799 353 aa2.53□□□□□ -2
PCM1-219ENST00000523540 MAB21L1Q13394 359 aa2.53□□□□□ -2
PCM1-219ENST00000523540 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
PCM1-219ENST00000523540 CEMP1Q6PRD7 247 aaPredicted RBP2.53□□□□□ -2
PCM1-219ENST00000523540 IGFL1Q6UW32 110 aa2.53□□□□□ -2
PCM1-219ENST00000523540 CCDC73Q6ZRK6 1079 aa2.53□□□□□ -2
PCM1-219ENST00000523540 WDR86Q86TI4 376 aa2.53□□□□□ -2
PCM1-219ENST00000523540 OAFQ86UD1 273 aa2.53□□□□□ -2
PCM1-219ENST00000523540 RIMKLAQ8IXN7 391 aa2.53□□□□□ -2
PCM1-219ENST00000523540 LYPD1Q8N2G4 141 aa2.53□□□□□ -2
PCM1-219ENST00000523540 ZNF615Q8N8J6 731 aa2.53□□□□□ -2
PCM1-219ENST00000523540 B3GNT7Q8NFL0 401 aa2.53□□□□□ -2
PCM1-219ENST00000523540 OR10J6PQ8NGY7 276 aa2.53□□□□□ -2
PCM1-219ENST00000523540 GPR151Q8TDV0 419 aa2.53□□□□□ -2
PCM1-219ENST00000523540 ABHD3Q8WU67 409 aa2.53□□□□□ -2
PCM1-219ENST00000523540 SLC25A2Q9BXI2 301 aa2.53□□□□□ -2
PCM1-219ENST00000523540 PARP12Q9H0J9 701 aaKnown RBP2.53□□□□□ -2
PCM1-219ENST00000523540 ZNRD1Q9P1U0 126 aa2.53□□□□□ -2
PCM1-219ENST00000523540 ING4Q9UNL4 249 aa2.53□□□□□ -2
PCM1-219ENST00000523540 CAMTA1Q9Y6Y1 1673 aa2.53□□□□□ -2
PCM1-219ENST00000523540 TUBGCP6Q96RT7 1819 aa2.52□□□□□ -2.01
PCM1-219ENST00000523540 GAKO14976 1311 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms