RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF696Q9H7X3 374 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 CCNB1IP1Q9NPC3 277 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 EIF3KQ9UBQ5 218 aaKnown RBP21.97■■□□□ 1.11
PVT1-219ENST00000523427 SLC7A7Q9UM01 511 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 TRIM33Q9UPN9 1127 aa21.97■■□□□ 1.11
PVT1-219ENST00000523427 ZSCAN5BA6NJL1 495 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 FSHBP01225 129 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 THY1P04216 161 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 F13BP05160 661 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 MMP7P09237 267 aaPredicted RBP21.96■■□□□ 1.11
PVT1-219ENST00000523427 SBK2P0C263 348 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 STOMP27105 288 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 CDAP32320 146 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 SPRNQ5BIV9 151 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 ARMCX4Q5H9R4 360 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 TMEM255AQ5JRV8 349 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 FAM209AQ5JX71 171 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 EPGNQ6UW88 154 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 ZNF101Q8IZC7 436 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 SLC25A40Q8TBP6 338 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 ADAMTS16Q8TE57 1224 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 TAF15Q92804 592 aaKnown RBP eCLIP21.96■■□□□ 1.118e-6■□□□□ 10.8
PVT1-219ENST00000523427 EGLN1Q9GZT9 426 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 KCNN2Q9H2S1 579 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 MMP26Q9NRE1 261 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 NKIRAS1Q9NYS0 192 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 ZNF69Q9UC07 566 aa21.96■■□□□ 1.11
PVT1-219ENST00000523427 C5orf49A4QMS7 147 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 M0QX08 132 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 UBOX5O94941 541 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 BCL6BQ8N143 479 aaPredicted RBP21.95■■□□□ 1.1
PVT1-219ENST00000523427 GPR32P1Q8NGA4 272 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 OR4D11Q8NGI4 311 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 AKR7LQ8NHP1 331 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 OR2J1Q9GZK6 312 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 SLCO1B3Q9NPD5 702 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 DCAF16Q9NXF7 216 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 LEF1Q9UJU2 399 aaPredicted RBP21.95■■□□□ 1.1
PVT1-219ENST00000523427 ZNF229Q9UJW7 825 aa21.95■■□□□ 1.1
PVT1-219ENST00000523427 DNAJC9-AS1A6NH13 148 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 POLR3GO15318 223 aaPredicted RBP21.94■■□□□ 1.1
PVT1-219ENST00000523427 FMO6PO60774 539 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 FOXH1O75593 365 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 LYPD3O95274 346 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 SLC2A10O95528 541 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 GPX2P18283 190 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 PRTN3P24158 256 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 WNT5AP41221 380 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 MMP15P51511 669 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 SLC3A1Q07837 685 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 BAMBIQ13145 260 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 SGCAQ16586 387 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 NOXO1Q8NFA2 376 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 NSMAFQ92636 917 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 EVA1AQ9H8M9 152 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 UNKLQ9H9P5 680 aaKnown RBP21.94■■□□□ 1.1
PVT1-219ENST00000523427 MSL2Q9HCI7 577 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 CORO2BQ9UQ03 480 aa21.94■■□□□ 1.1
PVT1-219ENST00000523427 TRBV5-3A0A0A0MS03 114 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 A0A1W2PRG6 482 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 ZNF32P17041 273 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 GDI2P50395 445 aaKnown RBP21.93■■□□□ 1.1
PVT1-219ENST00000523427 ATP4BP51164 291 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 CYP51A1Q16850 503 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 PDLIM3Q53GG5 364 aaPredicted RBP21.93■■□□□ 1.1
PVT1-219ENST00000523427 AGKQ53H12 422 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 TSPYL5Q86VY4 417 aaPredicted RBP21.93■■□□□ 1.1
PVT1-219ENST00000523427 DEFB108BQ8NET1 73 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 ABHD4Q8TB40 342 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 KLF14Q8TD94 323 aaPredicted RBP21.93■■□□□ 1.1
PVT1-219ENST00000523427 LRRC58Q96CX6 371 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 MARS2Q96GW9 593 aaKnown RBP21.93■■□□□ 1.1
PVT1-219ENST00000523427 NUP50Q9UKX7 468 aa21.93■■□□□ 1.1
PVT1-219ENST00000523427 TRAPPC13A5PLN9 417 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 TRMUO75648 421 aaKnown RBP21.92■■□□□ 1.1
PVT1-219ENST00000523427 ASAH2BP0C7U1 165 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 ACADSP16219 412 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 HIST3H3Q16695 136 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 TREML4Q6UXN2 200 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 CROCCP2Q86T23 111 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 PTOV1Q86YD1 416 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 C11orf65Q8NCR3 313 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 ASB10Q8WXI3 467 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 POM121L2Q96KW2 1035 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 EBF4Q9BQW3 602 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 CPPED1Q9BRF8 314 aaPredicted RBP21.92■■□□□ 1.1
PVT1-219ENST00000523427 SIAEQ9HAT2 523 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 NPHS2Q9NP85 383 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 EGFL7Q9UHF1 273 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 PURGQ9UJV8 347 aaKnown RBP21.92■■□□□ 1.1
PVT1-219ENST00000523427 AUP1Q9Y679 476 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 TRRAPQ9Y4A5 3859 aa21.92■■□□□ 1.1
PVT1-219ENST00000523427 LOC100509620A0A075B734 347 aa21.91■■□□□ 1.1
PVT1-219ENST00000523427 MAGOHP61326 146 aaKnown RBP21.91■■□□□ 1.1
PVT1-219ENST00000523427 ERVK-25P63136 954 aa21.91■■□□□ 1.1
PVT1-219ENST00000523427 FMODQ06828 376 aa21.91■■□□□ 1.1
PVT1-219ENST00000523427 RPL18Q07020 188 aaKnown RBP21.91■■□□□ 1.1
PVT1-219ENST00000523427 NRN1LQ496H8 165 aa21.91■■□□□ 1.1
PVT1-219ENST00000523427 RFPL4BQ6ZWI9 263 aa21.91■■□□□ 1.1
PVT1-219ENST00000523427 DOK3Q7L591 496 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms