RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ATP1B1P05026 303 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 SERPINE2P07093 398 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 ZNF44P15621 663 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 SIGLEC14Q08ET2 396 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TMEM92Q6UXU6 159 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 OR6F1Q8NGZ6 308 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 OR4Q3Q8NH05 313 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TSLPQ969D9 159 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 APH1AQ96BI3 265 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TEX37Q96LM6 180 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 PAPOLGQ9BWT3 736 aaKnown RBP14.83□□□□□ -0.04
USP42-207ENST00000521713 COL4A5P29400 1685 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 FAM166BA8MTA8 275 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 ABHD16AO95870 558 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 LGI1O95970 557 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 DBHP09172 617 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 GZMKP49863 264 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 FOXK2Q01167 660 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TMEM215Q68D42 235 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TBPL2Q6SJ96 375 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 OR5T1Q8NG75 326 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 DUSP21Q9H596 190 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 WDR76Q9H967 626 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 ERVMER34-1Q9H9K5 563 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 CBY1Q9Y3M2 126 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 MICAL3Q7RTP6 2002 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 D6RAR5 112 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 CARFQ8N187 725 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 BCORP1Q8N888 145 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 SMRP1Q8NCR6 262 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TMEM255BQ8WV15 326 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 SLC35A4Q96G79 324 aa14.83□□□□□ -0.04
USP42-207ENST00000521713 TMEM129A0AVI4 362 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TRABD2BA6NFA1 517 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TMEM212A6NML5 194 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 B4DXG7 233 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TO15178 435 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 EFNA3P52797 238 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TLE4Q04727 773 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 SQSTM1Q13501 440 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 RNF212Q495C1 297 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 OR5M11Q96RB7 305 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 DCLRE1CQ96SD1 692 aaKnown RBP14.82□□□□□ -0.04
USP42-207ENST00000521713 CHST8Q9H2A9 424 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 B3GALT1Q9Y5Z6 326 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TMEM72A0PK05 275 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TSPAN12O95859 305 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 GP2P55259 537 aaKnown RBP14.82□□□□□ -0.04
USP42-207ENST00000521713 CLDN6P56747 220 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 FZD2Q14332 565 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 SLC10A1Q14973 349 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 DLEU7Q6UYE1 221 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 BORCS7Q96B45 105 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 C8orf44Q96CB5 159 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 ZNF845Q96IR2 970 aaPredicted RBP14.82□□□□□ -0.04
USP42-207ENST00000521713 LAT2Q9GZY6 243 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 C1orf123Q9NWV4 160 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 REV1Q9UBZ9 1251 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 SURF4O15260 269 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 PNLIPRP2P54317 469 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 BTG2P78543 158 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 CRMP1Q14194 572 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 ZNF684Q5T5D7 378 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 TCTE3Q8IZS6 198 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 NMNAT3Q96T66 252 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 M0R296 226 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 HTR1FP30939 366 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 NXPH1P58417 271 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 MFGE8Q08431 387 aaPredicted RBP14.82□□□□□ -0.04
USP42-207ENST00000521713 SLC22A6Q4U2R8 563 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 LCN10Q6JVE6 187 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 RBMS3Q6XE24 437 aaKnown RBP14.82□□□□□ -0.04
USP42-207ENST00000521713 Q7L0L9 218 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 ZFP82Q8N141 532 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 ST8SIA1Q92185 356 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 CDCA4Q9BXL8 241 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 AMBRA1Q9C0C7 1298 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 ASB1Q9Y576 335 aa14.82□□□□□ -0.04
USP42-207ENST00000521713 A6NIN4 97 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 OR2F2O95006 317 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SCGB1D1O95968 90 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 OR8G3PP0DMU2 310 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SNRPBP14678 240 aaKnown RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 PIGAP37287 484 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SELENBP1Q13228 472 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 OR2F1Q13607 317 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 IL11RAQ14626 422 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 MPEG1Q2M385 716 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 H3F3CQ6NXT2 135 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 DND1Q8IYX4 353 aaKnown RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 FYTTD1Q96QD9 318 aaKnown RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 IFT22Q9H7X7 185 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 DUSP8Q13202 625 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 SLC35D3Q5M8T2 416 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 C16orf52Q8NHV5 167 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 ABHD4Q8TB40 342 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 ISYNA1Q9NPH2 558 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 ZNF629Q9UEG4 869 aaPredicted RBP14.81□□□□□ -0.04
USP42-207ENST00000521713 H7C1C5 153 aa14.81□□□□□ -0.04
USP42-207ENST00000521713 HMGN4O00479 90 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms