RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ANKRD9Q96BM1 317 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 C16orf74Q96GX8 76 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SMIM14Q96QK8 99 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ANKRD60Q9BZ19 345 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 ADAP2Q9NPF8 381 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 RRAGDQ9NQL2 400 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 TUBG2Q9NRH3 451 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PRR34Q9NV39 138 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 AIG1Q9NVV5 245 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 TREM2Q9NZC2 230 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 CD274Q9NZQ7 290 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 GCNT4Q9P109 453 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PITPNC1Q9UKF7 332 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMCO1Q9UM00 188 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 SSH2Q76I76 1423 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 PHLPP1O60346 1717 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 LTBP1Q14766 1721 aa2.39□□□□□ -2.03
HMGN1P28-201ENST00000521340 STRCP1A6NGW2 1772 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 MYH8P13535 1937 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLIT3O75094 1523 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ITGB4P16144 1822 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TRBV9A0A0B4J1U6 114 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 A0A1B0GTQ1 180 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 RBMY1BA6NDE4 496 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 RBMY1EA6NEQ0 496 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 LRRIQ4A6NIV6 560 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 BOLA2-SMG1P6H3BVE0 249 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 PANO1I0J062 215 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 AGPAT2O15120 278 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 AKR7A2O43488 359 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TRAF3IP2O43734 574 aaPredicted RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 DNAJB6O75190 326 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 WBP4O75554 376 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR2J3O76001 311 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 H6PDO95479 791 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 C2P06681 752 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 RBMY1DP0C7P1 496 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 RBMY1A1P0DJD3 496 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TDGF1P13385 188 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 IFNA8P32881 189 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 CTRLP40313 264 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 GLP1RP43220 463 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TDGF1P3P51864 188 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ERVK-25P63136 954 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 CRB1P82279 1406 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ACVR1Q04771 509 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 DAZ2Q13117 558 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 PPP1R7Q15435 360 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 RNF212Q495C1 297 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 EOGTQ5NDL2 527 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPR157Q5UAW9 335 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM53Q6P2H8 277 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 UTS2BQ765I0 119 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TGIF2LYQ8IUE0 185 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ITPRIPQ8IWB1 547 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 PRR22Q8IZ63 422 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPD1LQ8N335 351 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 C14orf178Q8N769 122 aaPredicted RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 CEP112Q8N8E3 955 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ACOT4Q8N9L9 421 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR9A1PQ8NGU1 263 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 NEIL3Q8TAT5 605 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 STARD8Q92502 1023 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF578Q96N58 590 aaPredicted RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 EBF4Q9BQW3 602 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 NICN1Q9BSH3 213 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 C20orf24Q9BUV8 137 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 SRMSQ9H3Y6 488 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM165Q9HC07 324 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 KIAA1551Q9HCM1 1747 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 MRPS30Q9NP92 439 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 IL26Q9NPH9 171 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 DAZ3Q9NR90 486 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 CCL28Q9NRJ3 127 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 PTTG3PQ9NZH4 202 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 CHMP5Q9NZZ3 219 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 ABCD2Q9UBJ2 740 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 LSM7Q9UK45 103 aaKnown RBP2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 NUP50Q9UKX7 468 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TBC1D24Q9ULP9 559 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 VSIG4Q9Y279 399 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 TOGARAM1Q9Y4F4 1720 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 MMP24Q9Y5R2 645 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 AKAP11Q9UKA4 1901 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 LAMB1P07942 1786 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 DLEC1Q9Y238 1755 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 SYNRGQ9UMZ2 1314 aa2.38□□□□□ -2.03
HMGN1P28-201ENST00000521340 PLCH1Q4KWH8 1693 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 CNTNAP1P78357 1384 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 KIAA0232Q92628 1395 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 TNRQ92752 1358 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 USP27XA6NNY8 438 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 SPECC1L-ADORA2AF8WAN1 911 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 H0YHG0 523 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 WRBO00258 174 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 CASQ2O14958 399 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 NPIPB7O75200 414 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 SUPT7LO94864 414 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 FGGP02679 453 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms