RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 LIPMQ5VYY2 423 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 WDR73Q6P4I2 378 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 ERICH5Q6P6B1 374 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF551Q7Z340 670 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 STX12Q86Y82 276 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 SLC22A9Q8IVM8 553 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 NKAIN4Q8IVV8 208 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 PARP8Q8N3A8 854 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 C10orf53Q8N6V4 93 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 OR56A1Q8NGH5 318 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 OR56B2PQ8NGI1 322 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 OR52E2Q8NGJ4 325 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 METTL6Q8TCB7 284 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 AGR3Q8TD06 166 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 ADAMTS15Q8TE58 950 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 DYRK2Q92630 601 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 CDS1Q92903 461 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 MOAP1Q96BY2 351 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 ELMOD3Q96FG2 381 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 CEP19Q96LK0 163 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 GPR78Q96P69 363 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 ALKBH3Q96Q83 286 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 CGREF1Q99674 301 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 CITED2Q99967 270 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 BTBD10Q9BSF8 475 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM120AQ9BXJ8 343 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 WDR12Q9GZL7 423 aaKnown RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 QRSL1Q9H0R6 528 aaKnown RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 NELFAQ9H3P2 528 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 SAP30LQ9HAJ7 183 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 BATF3Q9NR55 127 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 CTPS2Q9NRF8 586 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 NECAP2Q9NVZ3 263 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 C1RLQ9NZP8 487 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM216Q9P0N5 145 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 HAO1Q9UJM8 370 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 FAF1Q9UNN5 650 aaPredicted RBP4.14□□□□□ -1.75
SDCBP-207ENST00000520168 INSIG2Q9Y5U4 225 aa4.14□□□□□ -1.75
SDCBP-207ENST00000520168 DNAH9Q9NYC9 4486 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 AQP7P3A6NL99 342 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 NR5A2O00482 541 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RGS13O14921 159 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SLC22A2O15244 555 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 HDAC3O15379 428 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GYG2O15488 501 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 HOXA3O43365 443 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ITM2AO43736 263 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 AKAP8O43823 692 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 NPHS1O60500 1241 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 STX11O75558 287 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SLC22A3O75751 556 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RSL1D1O76021 490 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ATP6V1G2O95670 118 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CSTAP01040 98 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GUSBP08236 651 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CELA3BP08861 270 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 KITP10721 976 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 BCKDHAP12694 445 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF35P13682 527 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 UQCRBP14927 111 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF12P17014 697 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 TCN1P20061 433 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRKACBP22694 351 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRDX6P30041 224 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RPL3P39023 403 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CAPZA2P47755 286 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RPL14P50914 215 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 POLR2HP52434 150 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PKNOX1P55347 436 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 KLF3P57682 345 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PROK1P58294 105 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CSNK2BP67870 215 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CCL8P80075 99 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ARF1P84077 181 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 COL10A1Q03692 680 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 LCP2Q13094 533 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 BLMHQ13867 455 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GNA13Q14344 377 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 LASP1Q14847 261 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PCLAFQ15004 111 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF141Q15928 474 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 IMPG1Q17R60 797 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GSG1Q2KHT4 349 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRSS53Q2L4Q9 553 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 DNAL1Q4LDG9 190 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 KLHL22Q53GT1 634 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CFAP157Q5JU67 520 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PDZK1Q5T2W1 519 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 AVPI1Q5T686 147 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRAMEF8Q5VWM4 474 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRAMEF7Q5VXH5 474 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM225Q6GV28 225 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RGS7BPQ6MZT1 257 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 BTNL3Q6UXE8 466 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 LRRN1Q6UXK5 716 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF620Q6ZNG0 422 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF600Q6ZNG1 722 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GPRIN3Q6ZVF9 776 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GPAT4Q86UL3 456 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 MDP1Q86V88 176 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms