RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SLC25A44Q96H78 314 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 TMEM43Q9BTV4 400 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 NUF2Q9BZD4 464 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 RAD21L1Q9H4I0 556 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 RMND5AQ9H871 391 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 MEAF6Q9HAF1 191 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 NPHS2Q9NP85 383 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 A4GALTQ9NPC4 353 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 SLC6A13Q9NSD5 602 aa9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 EIF3KQ9UBQ5 218 aaKnown RBP9.66□□□□□ -0.86
TRAPPC9-203ENST00000517667 A0A0B4J2E0 115 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 A0A1B0GX12 115 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 TMEM120BA0PK00 339 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 FAM181BA6NEQ2 426 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 ZSCAN5BA6NJL1 495 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 SRRM5B3KS81 715 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 C11orf98E9PRG8 122 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 H3BSA7 217 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 HOXA3O43365 443 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 NDUFA7O95182 113 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 GPANK1O95872 356 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 PLATP00750 562 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 NGFP01138 241 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 ALDOCP09972 364 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 IGHV4-38-2P0DP08 117 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 CPT2P23786 658 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 IL12AP29459 219 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 MDH1P40925 334 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 ETV4P43268 484 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 ZNF84P51523 738 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 GNGT1P63211 74 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 PAX8Q06710 450 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 SRSF4Q08170 494 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 FADDQ13158 208 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 PDCD1Q15116 288 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 LRFN4Q6PJG9 635 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 LRRN1Q6UXK5 716 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 MUC20Q8N307 709 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 KIR3DL3Q8N743 410 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 GEMIN6Q8WXD5 167 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 UPRTQ96BW1 309 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 MARS2Q96GW9 593 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 RBM4BQ9BQ04 359 aaKnown RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 SPATA5L1Q9BVQ7 753 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 RSPO3Q9BXY4 272 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 KCNN2Q9H2S1 579 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 TMEM27Q9HBJ8 222 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 TMEM106BQ9NUM4 274 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 EGFL7Q9UHF1 273 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 LRCH1Q9Y2L9 728 aa9.65□□□□□ -0.86
TRAPPC9-203ENST00000517667 CLPSL1A2RUU4 121 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 F5H0A9 414 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 BIRC5O15392 142 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 TGDSO95455 350 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 IGHG1P01857 330 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 QDPRP09417 244 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 PGA4P0DJD7 388 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 PGA3P0DJD8 388 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 TNFRSF1AP19438 455 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 CCNOP22674 350 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 TNFSF4P23510 183 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 STOMP27105 288 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 SEC61A1P61619 476 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 BTG1P62324 171 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 TNFAIP6P98066 277 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 SPATA46Q5T0L3 261 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 THEM4Q5T1C6 240 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 DHRS4L2Q6PKH6 230 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 MSANTD1Q6ZTZ1 278 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 RHOUQ7L0Q8 258 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZER1Q7Z7L7 766 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 RANBP3LQ86VV4 465 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 LRRC28Q86X40 367 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 KRT73Q86Y46 540 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF101Q8IZC7 436 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZNF283Q8N7M2 679 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 HIPK4Q8NE63 616 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 BHLHE22Q8NFJ8 381 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 SLC25A40Q8TBP6 338 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 VPS33AQ96AX1 596 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 THOC1Q96FV9 657 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 ITCHQ96J02 903 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 DCLRE1CQ96SD1 692 aaKnown RBP9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 SLC30A2Q9BRI3 323 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 PRDM13Q9H4Q3 707 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 EVA1AQ9H8M9 152 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 NANOGQ9H9S0 305 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 HAO1Q9UJM8 370 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 TRIM33Q9UPN9 1127 aa9.64□□□□□ -0.87
TRAPPC9-203ENST00000517667 IGHV3OR16-10A0A075B7F0 116 aa9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 TRAV40A0A0B4J280 105 aa9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 LRRN3E7EW58 273 aa9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 RNF13O43567 381 aa9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 TYROBPO43914 113 aa9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 SHOX2O60902 331 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC9-203ENST00000517667 MMP7P09237 267 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms