RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SEC61A2Q9H9S3 476 aa6.17□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SIAEQ9HAT2 523 aa6.17□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NDUFAF4Q9P032 175 aa6.17□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF346Q9UL40 294 aaKnown RBP6.17□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NIPBLQ6KC79 2804 aaeCLIP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 A0A1W2PPL8 197 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SH3PXD2BA1X283 911 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 M0R233 179 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NDUFS8O00217 210 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ARPC2O15144 300 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 AHCYL1O43865 530 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 OR10H3O60404 316 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 KRT36O76013 467 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 DIRAS1O95057 198 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PRSS23O95084 383 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NDUFB2O95178 105 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SLC2A10O95528 541 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MT-ND5P03915 603 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PATE4P0C8F1 98 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF35P13682 527 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CCNOP22674 350 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CDAP32320 146 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MSX2P35548 267 aaPredicted RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 EVX1P49640 407 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF133P52736 654 aaPredicted RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ERVK-25P63136 954 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 VLDLRP98155 873 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 HGFACQ04756 655 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 FMODQ06828 376 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CARTPTQ16568 116 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MOGQ16653 247 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MST1LQ2TV78 715 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 GPR139Q6DWJ6 353 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ARL9Q6T311 187 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MYPOPQ86VE0 399 aaPredicted RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 DHFR2Q86XF0 187 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MEX3DQ86XN8 651 aaKnown RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZDHHC21Q8IVQ6 265 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 WDFY1Q8IWB7 410 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SVOPLQ8N434 492 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 LINC00471Q8N535 108 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 FITM2Q8N6M3 262 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF525Q8N782 197 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ARIH2OSQ8N7S6 290 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ICA1LQ8NDH6 482 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF540Q8NDQ6 660 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SNX33Q8WV41 574 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NEU4Q8WWR8 484 aaPredicted RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 C11orf40Q8WZ69 217 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 HTRA1Q92743 480 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 C7orf34Q96L11 122 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 LRGUKQ96M69 825 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF75AQ96N20 296 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 TSPAN32Q96QS1 320 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SEPHS2Q99611 448 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PIMREGQ9BSJ6 248 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 BCL2L14Q9BZR8 327 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MUC13Q9H3R2 512 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MS4A5Q9H3V2 200 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 IL1RAPQ9NPH3 570 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZNF224Q9NZL3 707 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 EIF3KQ9UBQ5 218 aaKnown RBP6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CD300AQ9UGN4 299 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZFHX3Q15911 3703 aa6.16□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ZANQ9Y493 2812 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 IGHV4-30-2A0A087WSY4 118 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 TRBV4-1A0A0J9YWV2 114 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 A0A1W2PPW3 197 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 LOC390937A0A1W2PQ73 354 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PRSS37A4D1T9 235 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 UNC119BA6NIH7 251 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 C12orf71A8MTZ7 269 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CDC42EP2O14613 210 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SYNGR3O43761 229 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SNAP29O95721 258 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 LCKP06239 509 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 ADRA2AP08913 450 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 CST2P09228 141 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 MSR1P21757 451 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 STOMP27105 288 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PCSK6P29122 969 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NOS3P29474 1203 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SDHAP31040 664 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 RRM2P31350 389 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 OMPP47874 163 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 GDI2P50395 445 aaKnown RBP6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 LSM11P83369 360 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 KRR1Q13601 381 aaKnown RBP6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 FXNQ16595 210 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 NKPD1Q17RQ9 610 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 IQCCQ4KMZ1 466 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 FAM98BQ52LJ0 330 aaKnown RBP6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 PABPC1L2AQ5JQF8 200 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 FAM27BQ5VT28 67 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 DNM1P34Q6PK57 102 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SLC25A47Q6Q0C1 308 aa6.15□□□□□ -1.42
SCARNA18.2-201ENST00000516882 SMARCD3Q6STE5 483 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms