RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 STOMP27105 288 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 LIPAP38571 399 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 MPV17P39210 176 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZNF154Q13106 437 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 PABPC1L2AQ5JQF8 200 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 SPATA46Q5T0L3 261 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 THEM4Q5T1C6 240 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 TTC33Q6PID6 262 aaPredicted RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 UNQ6126/PRO20091Q6UXV3 157 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 MAVSQ7Z434 540 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZNF101Q8IZC7 436 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 BCL6BQ8N143 479 aaPredicted RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 SYT14Q8NB59 555 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 MARS2Q96GW9 593 aaKnown RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZNF347Q96SE7 839 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 SLITRK2Q9H156 845 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 SLCO1B3Q9NPD5 702 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 SLAMF8Q9P0V8 285 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 CGGBP1Q9UFW8 167 aaPredicted RBP13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZNF229Q9UJW7 825 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZDHHC8Q9ULC8 765 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 CORO2BQ9UQ03 480 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 NPTNQ9Y639 398 aa13.32□□□□□ -0.28
LMNA-223ENST00000515459 ZSCAN5BA6NJL1 495 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 M0R3H8 397 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 IGHMP01871 453 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 UMPSP11172 480 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 WNT5AP41221 380 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 WDR4P57081 412 aaKnown RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 STX1BP61266 288 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 KLF17Q5JT82 389 aaPredicted RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 ENTPD8Q5MY95 495 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 MBNL2Q5VZF2 373 aaKnown RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 C1orf174Q8IYL3 243 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 KLHL36Q8N4N3 616 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 SMYD1Q8NB12 490 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 HIPK4Q8NE63 616 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 NOXO1Q8NFA2 376 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 KLF14Q8TD94 323 aaPredicted RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 ZNF48Q96MX3 618 aaPredicted RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 DIRC2Q96SL1 478 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 OR2J1Q9GZK6 312 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 VAPAQ9P0L0 249 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
LMNA-223ENST00000515459 GMEB1Q9Y692 573 aa13.31□□□□□ -0.28
LMNA-223ENST00000515459 A0A0G2JK05 382 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 CENPBD1B2RD01 187 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 MCIDASD6RGH6 385 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 BLOC1S5-TXNDC5H3BN57 136 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 TRAPPC2LH3BP13 241 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 CLDN34H7C241 214 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 KPNA4O00629 521 aaPredicted RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 IGHV2-70P01814 119 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 CD55P08174 381 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 SBK2P0C263 348 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ASAH2BP0C7U1 165 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ZNF12P17014 697 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ZNF32P17041 273 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 GPX2P18283 190 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 TMEM255AQ5JRV8 349 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 NANOGNBQ7Z5D8 188 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ADAMTS16Q8TE57 1224 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 GEMIN6Q8WXD5 167 aaKnown RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 DCLRE1CQ96SD1 692 aaKnown RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 SEPHS2Q99611 448 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ARHGDIGQ99819 225 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 MRPL13Q9BYD1 178 aaKnown RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 SLC19A3Q9BZV2 496 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 MS4A7Q9GZW8 240 aaPredicted RBP13.3□□□□□ -0.28
LMNA-223ENST00000515459 IKZF5Q9H5V7 419 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 EGFL7Q9UHF1 273 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 ANGPT4Q9Y264 503 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 INSIG2Q9Y5U4 225 aa13.3□□□□□ -0.28
LMNA-223ENST00000515459 A0A1W2PRG6 482 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 TMEM120BA0PK00 339 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 C5orf49A4QMS7 147 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 EVPLLA8MZ36 301 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 MRPL19P49406 292 aaKnown RBP13.29□□□□□ -0.28
LMNA-223ENST00000515459 GDI2P50395 445 aaKnown RBP13.29□□□□□ -0.28
LMNA-223ENST00000515459 TNFAIP6P98066 277 aaPredicted RBP13.29□□□□□ -0.28
LMNA-223ENST00000515459 SLC9A3R2Q15599 337 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 NPTX1Q15818 432 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 DUSP7Q16829 419 aa13.29□□□□□ -0.28
LMNA-223ENST00000515459 SPRNQ5BIV9 151 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms