RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SPIN1Q9Y657 262 aaPredicted RBP3.36□□□□□ -1.87
CAST-242ENST00000515063 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
CAST-242ENST00000515063 V9GYH0 126 aa3.36□□□□□ -1.87
CAST-242ENST00000515063 HTTP42858 3142 aa3.36□□□□□ -1.87
CAST-242ENST00000515063 DOCK9Q9BZ29 2069 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TICRRQ7Z2Z1 1910 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 A0A0G2JNG1 304 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 A0A1W2PQL4 384 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 CCDC182A6NF36 153 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FABP12A6NFH5 140 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LRRC72A6NJI9 287 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LIPT2A6NK58 231 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CPSF4LA6NMK7 179 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 OR52A4PA6NMU1 304 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C2orf74A8MZ97 194 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C4orf51C9J302 202 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PRAC2D3DTV9 90 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 M0R129 80 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CASKO14936 926 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 RGS5O15539 181 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PTP4A3O75365 173 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CCNKO75909 580 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TSPAN9O75954 239 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 NKX2-2O95096 273 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LYPD3O95274 346 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 GPR75O95800 540 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SERPINA3P01011 423 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 UMODP07911 640 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 IGFBP1P08833 259 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 PRKAR1AP10644 381 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ALPPL2P10696 532 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 IL7P13232 177 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 EDN2P20800 178 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 DRD5P21918 477 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PAICSP22234 425 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 HNRNPA2B1P22626 353 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 F8A1P23610 371 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 GDI1P31150 447 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FEN1P39748 380 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 SOX3P41225 446 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 EVX1P49640 407 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF136P52737 540 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PDX1P52945 283 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 RAB8AP61006 207 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SKP1P63208 163 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ACTC1P68032 377 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ACTA1P68133 377 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 BTN3A2P78410 334 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 IGLV3-21P80748 117 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF155Q12901 538 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 ILF3Q12906 894 aaKnown RBP eCLIP3.35□□□□□ -1.87
CAST-242ENST00000515063 KIR2DS5Q14953 304 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SF3A2Q15428 464 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 ISXQ2M1V0 245 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 HSD17B12Q53GQ0 312 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 CCDC92Q53HC0 331 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 SOWAHCQ53LP3 525 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 GARNL3Q5VVW2 1013 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 RSBN1Q5VWQ0 802 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 LIPKQ5VXJ0 399 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C18orf63Q68DL7 685 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ANKRD54Q6NXT1 300 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 KCTD18Q6PI47 426 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF322Q6U7Q0 402 aaPredicted RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 ENPP7Q6UWV6 458 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FAM131AQ6UXB0 335 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 PAMR1Q6UXH9 720 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 BAIAP2L2Q6UXY1 529 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 C9orf139Q6ZV77 190 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF550Q7Z398 422 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 NUP54Q7Z3B4 507 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SZRD1Q7Z422 152 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 COMTD1Q86VU5 262 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 VRK2Q86Y07 508 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SNX29P2Q8IUI4 249 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 NKAIN4Q8IVV8 208 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LAX1Q8IWV1 398 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 NRMQ8IXM6 262 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SLC35F3Q8IY50 421 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MS4A15Q8N5U1 240 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LSMEM1Q8N8F7 131 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 AVL9Q8NBF6 648 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR52L1Q8NGH7 329 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR8D4Q8NGM9 314 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR9A2Q8NGT5 310 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR6F1Q8NGZ6 308 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 OR4Q3Q8NH05 313 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 FLVCR1-AS1Q8TAF5 88 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 TMEM239Q8WW34 195 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 LCN9Q8WX39 176 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 UCN3Q969E3 161 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ERGIC1Q969X5 290 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 SIPA1Q96FS4 1042 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MRPL48Q96GC5 212 aaKnown RBP3.35□□□□□ -1.87
CAST-242ENST00000515063 C16orf58Q96GQ5 468 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 MSANTD3Q96H12 275 aa3.35□□□□□ -1.87
CAST-242ENST00000515063 ZNF486Q96H40 463 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms