RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF587BE7ETH6 402 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 FFAR1O14842 300 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 ADRA2AP08913 450 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 UBCP0CG48 685 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 ADCYAP1P18509 176 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 CXCL2P19875 107 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 LIM2P55344 173 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 SELENOTP62341 195 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 SPIBQ01892 262 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 GPM6BQ13491 265 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 HLXQ14774 488 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 SYT9Q86SS6 491 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 NAXDQ8IW45 347 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 LGI4Q8N135 537 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 HORMAD2Q8N7B1 307 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 AMER3Q8N944 861 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TMEM104Q8NE00 496 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 FAM71CQ8NEG0 241 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 UBE2E3Q969T4 207 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TMEM56Q96MV1 263 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 WDFY2Q96P53 400 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 OR8B4Q96RC9 309 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TEX101Q9BY14 249 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 GPR83Q9NYM4 423 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 C5AR2Q9P296 337 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 PSORS1C1Q9UIG5 152 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TMEM56-RWDD3S4R434 201 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 LRP4O75096 1905 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 ATG2BQ96BY7 2078 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 A0A1B0GV72 72 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 CLCA1A8K7I4 914 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 GRXCR1A8MXD5 290 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 M0QZ24 198 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 M0R082 166 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 OGG1O15527 345 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TMPRSS11DO60235 418 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 EPHX1P07099 455 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 CHI3L1P36222 383 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 AKR1C3P42330 323 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 PPP2CBP62714 309 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 PPP2CAP67775 309 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 COL9A2Q14055 689 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 DOC2BQ14184 412 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 HEPACAMQ14CZ8 416 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 GLYR1Q49A26 553 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 NSUN5P2Q63ZY6 315 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TANGO2Q6ICL3 276 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF774Q6NX45 483 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 TRIM40Q6P9F5 258 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 B3GLCTQ6Y288 498 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 GPR32P1Q8NGA4 272 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 OR4K15Q8NH41 348 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 NEURL3Q96EH8 262 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 WFDC6Q9BQY6 131 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 SPRTNQ9H040 489 aaPredicted RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 PIGMQ9H3S5 423 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 EXOSC4Q9NPD3 245 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 RASL12Q9NYN1 266 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF346Q9UL40 294 aaKnown RBP6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 DSPPQ9NZW4 1301 aa6.81□□□□□ -1.32
PDLIM5-219ENST00000514743 COL4A2P08572 1712 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 LOC105369274A0A096LPK9 316 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 OR14I1A6ND48 311 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 PRR19A6NJB7 356 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF716A6NP11 495 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 C4orf51C9J302 202 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 C1QTNF3-AMACRE9PGA6 284 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 FAM227AF5H4B4 570 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 BCHEP06276 602 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF735P0CB33 412 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 CD8BP10966 210 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 IRF2P14316 349 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 GABRA1P14867 456 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 TBPP20226 339 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 SOAT1P35610 550 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 AGERQ15109 404 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 PDZD11Q5EBL8 140 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF529Q6P280 563 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 OR4N4Q8N0Y3 316 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 SLC38A5Q8WUX1 472 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 GEMIN6Q8WXD5 167 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 SUSD6Q92537 303 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 GGHQ92820 318 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 TOMM40LQ969M1 308 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 CLCC1Q96S66 551 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 PLA2G2FQ9BZM2 168 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 CHIAQ9BZP6 476 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 METTL17Q9H7H0 456 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 SYNPO2LQ9H987 977 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 MIEF1Q9NQG6 463 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 FTSJ1Q9UET6 329 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 CDH10Q9Y6N8 788 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 MYO10Q9HD67 2058 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 ANHXE9PGG2 379 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 BLOC1S5-TXNDC5H3BN57 136 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 SRPX2O60687 465 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 CA3P07451 260 aa6.8□□□□□ -1.32
PDLIM5-219ENST00000514743 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms