RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ARHGDIGQ99819 225 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 OR2J1Q9GZK6 312 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 BCL2L10Q9HD36 194 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 A4GALTQ9NPC4 353 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 THUMPD1Q9NXG2 353 aaKnown RBP9.17□□□□□ -0.94
DDX41-216ENST00000513562 ASH2LQ9UBL3 628 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 TRIM33Q9UPN9 1127 aa9.17□□□□□ -0.94
DDX41-216ENST00000513562 WNK2Q9Y3S1 2297 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 C5orf63A6NC05 138 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 G3V4G9 280 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 H3BSA7 217 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 BPGMP07738 259 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 MELTFP08582 738 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 WNT2P09544 360 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 ALDOCP09972 364 aaKnown RBP9.16□□□□□ -0.94
DDX41-216ENST00000513562 MYZAPP0CAP1 466 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 PGA4P0DJD7 388 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 PGA3P0DJD8 388 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 LBPP18428 481 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 CCNOP22674 350 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 CPT2P23786 658 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 STOMP27105 288 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 PRKAR1BP31321 381 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 MDH2P40926 338 aaKnown RBP9.16□□□□□ -0.94
DDX41-216ENST00000513562 NME5P56597 212 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 BPIFB3P59826 476 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 HSF2Q03933 536 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 C2orf68Q2NKX9 166 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 PABPC1L2AQ5JQF8 200 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 OGFOD2Q6N063 350 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 UNQ6126/PRO20091Q6UXV3 157 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 ZNF620Q6ZNG0 422 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 RFPL4BQ6ZWI9 263 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 SLC35D2Q76EJ3 337 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 REC114Q7Z4M0 266 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 COMTD1Q86VU5 262 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 C1orf174Q8IYL3 243 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 MUC20Q8N307 709 aaPredicted RBP9.16□□□□□ -0.94
DDX41-216ENST00000513562 OR5J2Q8NH18 312 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 TCP10LQ8TDR4 215 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 RAB40AQ8WXH6 277 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
DDX41-216ENST00000513562 POM121L2Q96KW2 1035 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 TMEM43Q9BTV4 400 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 SSBP3Q9BWW4 388 aaPredicted RBP9.16□□□□□ -0.94
DDX41-216ENST00000513562 SLC19A3Q9BZV2 496 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 NANOGQ9H9S0 305 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 TPT1P8Q9HAU6 139 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 MSL2Q9HCI7 577 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 TCF7L1Q9HCS4 588 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 POMT1Q9Y6A1 747 aa9.16□□□□□ -0.94
DDX41-216ENST00000513562 A0A0B4J2E0 115 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 A0A1B0GX12 115 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 TMEM247A6NEH6 219 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 C11orf98E9PRG8 122 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 ITM2AO43736 263 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 ICMTO60725 284 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 MT-ATP6P00846 226 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 QDPRP09417 244 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 ADORA3P0DMS8 318 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 MTX3Q5HYI7 312 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 SAMD5Q5TGI4 173 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 C10orf53Q8N6V4 93 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 BBS10Q8TAM1 723 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 UBLCP1Q8WVY7 318 aaPredicted RBP9.15□□□□□ -0.94
DDX41-216ENST00000513562 DYRK2Q92630 601 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 VPS33AQ96AX1 596 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 FAM71F1Q96KD3 344 aaPredicted RBP9.15□□□□□ -0.94
DDX41-216ENST00000513562 SAMD8Q96LT4 415 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDX41-216ENST00000513562 AIG1Q9NVV5 245 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 SELENONQ9NZV5 590 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 EIF3KQ9UBQ5 218 aaKnown RBP9.15□□□□□ -0.94
DDX41-216ENST00000513562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.15□□□□□ -0.94
DDX41-216ENST00000513562 ARHGAP32A7KAX9 2087 aa9.15□□□□□ -0.94
DDX41-216ENST00000513562 LOC100509620A0A075B734 347 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 KIR2DS1A0A191URI9 304 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 C5orf49A4QMS7 147 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 MGRN1O60291 552 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 SPAG7O75391 227 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 OR6A2O95222 327 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 PRB2P02812 416 aaPredicted RBP9.14□□□□□ -0.95
DDX41-216ENST00000513562 NUDT7P0C024 238 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 ZCCHC18P0CG32 403 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 ETS2P15036 469 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 TNFRSF1AP19438 455 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 PPP1CBP62140 327 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 MELKQ14680 651 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 HIST3H3Q16695 136 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 GTDC1Q4AE62 458 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
DDX41-216ENST00000513562 GPR157Q5UAW9 335 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 DHRS4L2Q6PKH6 230 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 LRRC18Q8N456 261 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 HIPK4Q8NE63 616 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 ABHD4Q8TB40 342 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 SSMEM1Q8WWF3 244 aa9.14□□□□□ -0.95
DDX41-216ENST00000513562 MAL2Q969L2 176 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms