RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LKAAEAR1Q8TD35 194 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 TMEM54Q969K7 222 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 FAM3DQ96BQ1 224 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 CXorf40BQ96DE9 158 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 ZNF488Q96MN9 340 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 SORT1Q99523 831 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 GPA33Q99795 319 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 OR52D1Q9H346 318 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 SLC38A10Q9HBR0 1119 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 RPH3ALQ9UNE2 315 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 IKBKGQ9Y6K9 419 aa0.67□□□□□ -2.3
PDGFC-208ENST00000512711 COL22A1Q8NFW1 1626 aaPredicted RBP0.67□□□□□ -2.3
PDGFC-208ENST00000512711 KMT2BQ9UMN6 2715 aaPredicted RBP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 RGSL1A5PLK6 1076 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 METTL21EPA6NDL7 271 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 MAPK13O15264 365 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 POLR2DO15514 142 aaKnown RBP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 MED7O43513 233 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 PRPSAP2O60256 369 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 H6PDO95479 791 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 OR8U9P0C7N5 309 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 SERPINB5P36952 375 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 TNFSF9P41273 254 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 NUTF2P61970 127 aaKnown RBP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 CDK16Q00536 496 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 OGDHQ02218 1023 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 FUT5Q11128 374 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 FAM53BQ14153 422 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 DGUOKQ16854 277 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 TATDN3Q17R31 274 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 FILIP1LQ4L180 1135 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 ADNP2Q6IQ32 1131 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 ASCL5Q7RTU5 278 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 LHFPL3Q86UP9 236 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 NUDCD3Q8IVD9 361 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 WDFY1Q8IWB7 410 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 ZNF680Q8NEM1 530 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 OR6N1Q8NGY5 312 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 TRMT10AQ8TBZ6 339 aaKnown RBP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 MAGEE2Q8TD90 523 aaPredicted RBP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 HGDQ93099 445 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.66□□□□□ -2.3
PDGFC-208ENST00000512711 SLC38A2Q96QD8 506 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 OR8B4Q96RC9 309 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 NPY6RQ99463 290 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 SH3GL3Q99963 347 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 SGK2Q9HBY8 427 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 CTSFQ9UBX1 484 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 LTBP2Q14767 1821 aa0.66□□□□□ -2.3
PDGFC-208ENST00000512711 CDHR2Q9BYE9 1310 aa0.65□□□□□ -2.3
PDGFC-208ENST00000512711 PRR14LQ5THK1 2151 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TRAV39A0A0B4J263 110 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TMEM120BA0PK00 339 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 BTNL10A8MVZ5 291 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 RAB3DO95716 219 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 NCF1P14598 390 aaPredicted RBP0.65□□□□□ -2.31
PDGFC-208ENST00000512711 NCK1P16333 377 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 DCKP27707 260 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 ATP6V1E1P36543 226 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TGFBR2P37173 567 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 FDFT1P37268 417 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 DUSP3P51452 185 aaPredicted RBP0.65□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF92Q03936 586 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 METTL21CQ5VZV1 264 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 STUMQ69YW2 141 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 DHDDSQ86SQ9 333 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 CDKL3Q8IVW4 592 aaPredicted RBP0.65□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF619Q8N2I2 560 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 SPANXA2-OT1Q8N9U9 137 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 GMCL1P1Q8NEA9 526 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 PHOSPHO2Q8TCD6 241 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 PIFOQ8TCI5 191 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TTC25Q96NG3 672 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 STACQ99469 402 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TM2D3Q9BRN9 247 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 TMEM59Q9BXS4 323 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 FGF23Q9GZV9 251 aaPredicted RBP0.65□□□□□ -2.31
PDGFC-208ENST00000512711 COQ10BQ9H8M1 238 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 GORASP2Q9H8Y8 452 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 C8orf17Q9NRJ1 99 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 BFARQ9NZS9 450 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 CTNNA3Q9UI47 895 aa0.65□□□□□ -2.31
PDGFC-208ENST00000512711 A8MUI8 341 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 C3orf84H3BNL1 204 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 FCMRO60667 390 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 EIF3GO75821 320 aaKnown RBP eCLIP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR7A10O76100 309 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 MFN2O95140 757 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 KLHL2O95198 593 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 IGLV3-25P01717 112 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 FGF1P05230 155 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 EPB41P11171 864 aaKnown RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ATP6V1C1P21283 382 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 IL10P22301 178 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 DTYMKP23919 212 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 LOXP28300 417 aaPredicted RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 SSTR5P35346 364 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 CHI3L1P36222 383 aaPredicted RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ATP5C1P36542 298 aaKnown RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 PPT1P50897 306 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms