RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MUC1P15941 1255 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GOT1P17174 413 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ELK1P19419 428 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TYMPP19971 482 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB5AP20339 215 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PRPS1L1P21108 318 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TNFSF4P23510 183 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PRPH2P23942 346 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GABRR1P24046 479 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 BTCP35070 178 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MAS1LP35410 378 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RPL4P36578 427 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GNALP38405 381 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 IFNGR2P38484 337 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RPL3P39023 403 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NNMTP40261 264 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SOX3P41225 446 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OMPP47874 163 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GZMMP51124 257 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 IDH3GP51553 393 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TMPRSS3P57727 454 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RGS8P57771 180 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM3BP58499 235 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ERVFC1-1P60608 527 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ZP1P60852 638 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RAP1BP61224 184 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SELENOWP63302 87 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SPIBQ01892 262 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TLE4Q04727 773 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MBTD1Q05BQ5 628 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PJVKQ0ZLH3 352 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MAPK14Q16539 360 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 DUOXA1Q1HG43 343 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NDUFAF6Q330K2 333 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB6CQ53S08 254 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 VWA2Q5GFL6 755 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 C9orf152Q5JTZ5 239 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FAM74A1Q5RGS3 127 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 HENMT1Q5T8I9 393 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TANGO2Q6ICL3 276 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3CQ6IPX1 549 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC30A6Q6NXT4 461 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 IL27RAQ6UWB1 636 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SLC36A4Q6YBV0 504 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 CERS6Q6ZMG9 384 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 Q6ZSV7 163 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ACOT7LQ6ZUV0 252 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ASB18Q6ZVZ8 466 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ARMCX2Q7L311 632 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TRMT1LQ7Z2T5 733 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 P4HA3Q7Z4N8 544 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NRROSQ86YC3 692 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GID4Q8IVV7 300 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TBC1D3Q8IZP1 549 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 GTPBP8Q8N3Z3 284 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 HDDC3Q8N4P3 179 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SAMD12Q8N8I0 201 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 LMNTD1Q8N9Z9 388 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF527Q8NB42 609 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 INO80EQ8NBZ0 244 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR4K2Q8NGD2 314 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR1J2Q8NGS2 313 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR1J1Q8NGS3 322 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR9A4Q8NGU2 314 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR2G2Q8NGZ5 317 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 OR5W2Q8NH69 310 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 M1APQ8TC57 530 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 DTD1Q8TEA8 209 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ING5Q8WYH8 240 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 MR1Q95460 341 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TAAR8Q969N4 342 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TADA1Q96BN2 335 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ECHDC3Q96DC8 303 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 CXorf40BQ96DE9 158 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 CMBLQ96DG6 245 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RHNO1Q9BSD3 238 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF426Q9BUY5 554 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FICDQ9BVA6 458 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SARGQ9BW04 601 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 SORBS1Q9BX66 1292 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PINK1Q9BXM7 581 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TM6SF2Q9BZW4 377 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 CHST5Q9GZS9 411 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RAB6CQ9H0N0 254 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 FXYD6Q9H0Q3 95 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 POLR3FQ9H1D9 316 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 INPP5EQ9NRR6 644 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NRBP2Q9NSY0 501 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 UQCC1Q9NVA1 299 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 RBM22Q9NW64 420 aaKnown RBP eCLIP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 KLHL9Q9P2J3 617 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 WRAP73Q9P2S5 460 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 ZNF282Q9UDV7 671 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 PCTPQ9UKL6 214 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 TSPAN16Q9UKR8 245 aa4.1□□□□□ -1.75
PDLIM5-211ENST00000508531 NEU3Q9UQ49 428 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms