RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MRPL46Q9H2W6 279 aaKnown RBP5.91□□□□□ -1.46
VCAN-207ENST00000507162 OR51I1Q9H343 314 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 C1orf198Q9H425 327 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 MID1IP1Q9NPA3 183 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 A4GALTQ9NPC4 353 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 TCF7L2Q9NQB0 619 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 INPP5EQ9NRR6 644 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 SNX24Q9Y343 169 aa5.91□□□□□ -1.46
VCAN-207ENST00000507162 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 M0R082 166 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 PHYHO14832 338 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 AIM2O14862 343 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 SURF4O15260 269 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 SERPINI2O75830 405 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 CLIC3O95833 236 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 INHBAP08476 426 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 GSTA2P09210 222 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 GKN3PP0CG01 181 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 SDC1P18827 310 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 EEF1B2P24534 225 aaKnown RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 GATA4P43694 442 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 PKNOX1P55347 436 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 COPZ1P61923 177 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 DGCR2P98153 550 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 DR1Q01658 176 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 PLAURQ03405 335 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 EPS8Q12929 822 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 KIAA0040Q15053 153 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF404Q494X3 552 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 LINC01559Q495D7 138 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 SLC36A2Q495M3 483 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 GPAT3Q53EU6 434 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ARSJQ5FYB0 599 aaPredicted RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 AP1ARQ63HQ0 302 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF841Q6ZN19 808 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 H1FNTQ75WM6 255 aaPredicted RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 SLC16A14Q7RTX9 510 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 TRIM46Q7Z4K8 759 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF101Q8IZC7 436 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ATG16L2Q8NAA4 619 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 C19orf18Q8NEA5 215 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF417Q8TAU3 575 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ABHD4Q8TB40 342 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 SFXN5Q8TD22 340 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF764Q96H86 408 aaPredicted RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 OR2V2Q96R30 315 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ZNF587Q96SQ5 575 aaPredicted RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 DDOQ99489 341 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 MECRQ9BV79 373 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 DPY30Q9C005 99 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 NPFFR1Q9GZQ6 430 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 MMADHCQ9H3L0 296 aaPredicted RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 GCM1Q9NP62 436 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 C1orf109Q9NX04 203 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ERVK-18Q9QC07 812 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 IL19Q9UHD0 177 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 ATP6V1HQ9UI12 483 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 STK38LQ9Y2H1 464 aa5.9□□□□□ -1.46
VCAN-207ENST00000507162 LSM4Q9Y4Z0 139 aaKnown RBP5.9□□□□□ -1.46
VCAN-207ENST00000507162 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.47
VCAN-207ENST00000507162 TANC2Q9HCD6 1990 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 A0A1B0GW55 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 MEIOCA2RUB1 952 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 C5orf49A4QMS7 147 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 FTCDNL1E5RQL4 147 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 MS4A18H0YCH9 400 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 TP73O15350 636 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ENTPD5O75356 428 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 GSTA1P08263 222 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 SBK3P0C264 359 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L2P0CJ85 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L3P0CJ86 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L5P0CJ88 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L6P0CJ89 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L7P0CJ90 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 NQO1P15559 274 aaKnown RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 NCF2P19878 526 aaPredicted RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 TAC1P20366 129 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 AHCYP23526 432 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 STOMP27105 288 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 WNT5AP41221 380 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 CSNK1A1P48729 337 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 PPP1CBP62140 327 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 PSG7Q13046 419 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 MS4A18Q3C1V0 323 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 WBP2NLQ6ICG8 309 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 TNFAIP8L2Q6P589 184 aaPredicted RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4L9Q6RFH8 374 aaPredicted RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 Q6ZR03 302 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ZCCHC23Q6ZST2 131 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 CCDC121Q6ZUS5 278 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 VMO1Q7Z5L0 202 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ZER1Q7Z7L7 766 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 LRRC18Q8N456 261 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 CCNYL1Q8N7R7 359 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 OR4K5Q8NGD3 323 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ACTRT1Q8TDG2 376 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms