RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RFLNBQ8N5W9 214 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 PFN4Q8NHR9 129 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 GEMIN6Q8WXD5 167 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 BPIFA2Q96DR5 249 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 TPD52L3Q96J77 140 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 SNX18Q96RF0 628 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 FNDC11Q9BVV2 318 aa12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 HINT3Q9NQE9 182 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-203ENST00000507004 LRP5LA4QPB2 252 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 C17orf100A8MU93 164 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 H3BSA7 217 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 AHCYL1O43865 530 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 IGHMP01871 453 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 LCKP06239 509 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 MMP7P09237 267 aaPredicted RBP12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 PATE4P0C8F1 98 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 IFI30P13284 250 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 ANPEPP15144 967 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 DRD4P21917 467 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 TUBG1P23258 451 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 ALDH3B1P43353 468 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 OR1E2P47887 323 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 RPL27P61353 136 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 CD47Q08722 323 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 FAM27BQ5VT28 67 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 ARL9Q6T311 187 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 RRM2BQ7LG56 351 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 SYT9Q86SS6 491 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 GLCCI1Q86VQ1 547 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 CYP4Z1Q86W10 505 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 SYT14Q8NB59 555 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 FAM156AQ8NDB6 213 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 CPEB3Q8NE35 698 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 ANKRD19PQ9H560 264 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 TUBG2Q9NRH3 451 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 CYSLTR2Q9NS75 346 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 C20orf141Q9NUB4 165 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
HMGCS1-203ENST00000507004 HPXP02790 462 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 FAM157BP0CG42 384 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 SAGP10523 405 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 TNFRSF1BP20333 461 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 STOMP27105 288 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 GCH1P30793 250 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 GDI2P50395 445 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 RUNX1T1Q06455 604 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 MSMPQ1L6U9 139 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 IFI44LQ53G44 452 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 HACD2Q6Y1H2 254 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 PHC2Q8IXK0 858 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 ACOT11Q8WXI4 607 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 MED4Q9NPJ6 270 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 GRIP1Q9Y3R0 1128 aa12.36□□□□□ -0.43
HMGCS1-203ENST00000507004 GSTA4O15217 222 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 CST2P09228 141 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 SEC24CP53992 1094 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 CTXN1P60606 82 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 MYBPC1Q00872 1141 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 PRKCDQ05655 676 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 SLC3A1Q07837 685 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 PABPC1L2AQ5JQF8 200 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 SLC25A47Q6Q0C1 308 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 CBLL1Q75N03 491 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 ZER1Q7Z7L7 766 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 OAFQ86UD1 273 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 LRP11Q86VZ4 500 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 SLC15A3Q8IY34 581 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 LRRC18Q8N456 261 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 OR1J1Q8NGS3 322 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 MOSPD2Q8NHP6 518 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 RCN3Q96D15 328 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 TIMD4Q96H15 378 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 RACGAP1Q9H0H5 632 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 DECR2Q9NUI1 292 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 NDRG4Q9ULP0 352 aaKnown RBP12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
HMGCS1-203ENST00000507004 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 PLSCR5A0PG75 271 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 C12orf71A8MTZ7 269 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 EFCAB9A8MZ26 197 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 CXCR6O00574 342 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 ICMTO60725 284 aa12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-203ENST00000507004 NAT2P11245 290 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms