RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TP53P04637 393 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 RPSAP08865 295 aaKnown RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF26P17031 533 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 KLK2P20151 261 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 LAP3P28838 519 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 HSPA13P48723 471 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 DAPP51397 102 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NUDT6P53370 316 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 CDC42P60953 191 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 RPS23P62266 143 aaKnown RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ERVK-25P63136 954 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 HSF2Q03933 536 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 PLP2Q04941 152 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 POU4F2Q12837 409 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NPRL3Q12980 569 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 PCK2Q16822 640 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 GSG1Q2KHT4 349 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 MESTQ5EB52 335 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 FAM209AQ5JX71 171 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 LCN1P1Q5VSP4 162 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 MEDAGQ5VYS4 303 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 SLX4IPQ5VYV7 408 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ARL9Q6T311 187 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF813Q6ZN06 617 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 C20orf204Q6ZNR8 217 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NCCRP1Q6ZVX7 275 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 SHFQ7M4L6 423 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 GID4Q8IVV7 300 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NPEPL1Q8NDH3 523 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 HAVCR2Q8TDQ0 301 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NINJ1Q92982 152 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 RFKQ969G6 155 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 PLEKHA8Q96JA3 519 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 Q96M85 177 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 WFIKKN1Q96NZ8 548 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 DDOQ99489 341 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NIPSNAP1Q9BPW8 284 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 KCNS3Q9BQ31 491 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 EMC6Q9BV81 110 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NMNAT2Q9BZQ4 307 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 FAIMQ9NVQ4 179 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 B3GNT2Q9NY97 397 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NDRG4Q9ULP0 352 aaKnown RBP7.41□□□□□ -1.22
PDGFC-205ENST00000506880 TIMM10BQ9Y5J6 103 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 MAST4O15021 2626 aa7.41□□□□□ -1.22
PDGFC-205ENST00000506880 NAV2Q8IVL1 2488 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 IQCMA0A1B0GVH7 501 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SLC22A31A6NKX4 558 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 E9PQ18 207 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 H0YAE9 185 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PHYHO14832 338 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SURF4O15260 269 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SLC16A6O15403 523 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CTAG2O75638 210 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 RAD51DO75771 328 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 LYZL6O75951 148 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PPP1R3DO95685 299 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 RAB36O95755 333 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CRYAAP02489 173 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SERPINA5P05154 406 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CD3EP07766 207 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 BMP4P12644 408 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ANPEPP15144 967 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 HIST1H1CP16403 213 aaKnown RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 FMO3P31513 532 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 EVX1P49640 407 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 RGS6P49758 472 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 LSM11P83369 360 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ARF1P84077 181 aaKnown RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 EFNB1P98172 346 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 KEAP1Q14145 624 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PTGES3Q15185 160 aaKnown RBP7.4□□□□□ -1.22
PDGFC-205ENST00000506880 CDSNQ15517 529 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 TAB1Q15750 504 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 NXNL2Q5VZ03 156 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 TTC23Q5W5X9 447 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF544Q6NX49 715 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 DEGS2Q6QHC5 323 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SLC16A14Q7RTX9 510 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 TMEM179BQ7Z7N9 219 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 AMIGO2Q86SJ2 522 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF454Q8N9F8 522 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 WDR31Q8NA23 367 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 NUP37Q8NFH4 326 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 GJC3Q8NFK1 279 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 Q96MT0 163 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 PKP2Q99959 881 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 HDHD2Q9H0R4 259 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 ZNF442Q9H7R0 627 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 SP140LQ9H930 580 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 MARCH7Q9H992 704 aa7.4□□□□□ -1.22
PDGFC-205ENST00000506880 RNPEPL1Q9HAU8 725 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms