RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 DDX28Q9NUL7 540 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
PDLIM7-213ENST00000505074 FBP2O00757 339 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 MRASO14807 208 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 NCR1O76036 304 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 OR7A10O76100 309 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CLPTM1O96005 669 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 DRD4P21917 467 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CCNOP22674 350 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 APLNRP35414 380 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 AQP2P41181 271 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 UBA52P62987 128 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CD47Q08722 323 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 LRRC23Q53EV4 343 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 METTL21CQ5VZV1 264 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 HIST2H2BDQ6DRA6 164 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CCDC80Q76M96 950 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 NKAIN4Q8IVV8 208 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 BPIFB2Q8N4F0 458 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 SYNPRQ8TBG9 265 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 ASB10Q8WXI3 467 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 SLC6A7Q99884 636 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 ZNF426Q9BUY5 554 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CCNB1IP1Q9NPC3 277 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 ZNF275Q9NSD4 429 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 RIMS3Q9UJD0 308 aa13.68□□□□□ -0.22
PDLIM7-213ENST00000505074 CDC14BO60729 498 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 TRMUO75648 421 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 OR5F1O95221 314 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 SLC2A10O95528 541 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 IFNA14P01570 189 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 GAAP10253 952 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 ACADSP16219 412 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 RBM34P42696 430 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 RAD52P43351 418 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 MAGEB1P43366 347 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 OR1E2P47887 323 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 GZMMP51124 257 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 CRYBA2P53672 197 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 ERVS71-1P61550 626 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 CCL8P80075 99 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 GLO1Q04760 184 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 PIN1Q13526 163 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 YIPF5Q969M3 257 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 LRRC58Q96CX6 371 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 TPD52L3Q96J77 140 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 TSPAN32Q96QS1 320 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 ZNF416Q9BWM5 594 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 MED31Q9Y3C7 131 aa13.67□□□□□ -0.22
PDLIM7-213ENST00000505074 MT-ND5P03915 603 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 ANPEPP15144 967 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 CDAP32320 146 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 MAPRE2Q15555 327 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 SGCAQ16586 387 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 ERICH5Q6P6B1 374 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 OR8J3Q8NGG0 315 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 OR1J1Q8NGS3 322 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 MOSPD2Q8NHP6 518 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 NSMAFQ92636 917 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 BCL2L14Q9BZR8 327 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 POLR2J2Q9GZM3 115 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 POLR2J3Q9H1A7 115 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 VIPAS39Q9H9C1 493 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 NTN4Q9HB63 628 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 C20orf141Q9NUB4 165 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 SLCO1C1Q9NYB5 712 aa13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
PDLIM7-213ENST00000505074 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 PIP5K1CO60331 668 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 AVPP01185 164 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 IFNA8P32881 189 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 UCP2P55851 309 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 TMEM33P57088 247 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 FMODQ06828 376 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 KLF10Q13118 480 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 PABPC1L2AQ5JQF8 200 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 CALHM3Q86XJ0 350 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 UNKLQ9H9P5 680 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 DECR2Q9NUI1 292 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 GID8Q9NWU2 228 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 PPIAL4AQ9Y536 164 aa13.65□□□□□ -0.22
PDLIM7-213ENST00000505074 VWFP04275 2813 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms