RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 M0R233 179 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 CDC42EP2O14613 210 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 IMPA2O14732 288 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 NPPAP01160 153 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 IGF2P01344 180 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 IFI30P13284 250 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 NCK1P16333 377 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 EVX1P49640 407 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 SELENOWP63302 87 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 LIPEQ05469 1076 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 DBPQ10586 325 aaPredicted RBP11.22□□□□□ -0.61
DDX41-204ENST00000504807 CR1LQ2VPA4 569 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 PABPC1L2AQ5JQF8 200 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
DDX41-204ENST00000504807 ERICH5Q6P6B1 374 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 SLC25A47Q6Q0C1 308 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 SLC16A14Q7RTX9 510 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 OR13C2Q8NGS9 318 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 AKR7LQ8NHP1 331 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 ZNF519Q8TB69 540 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 NSMAFQ92636 917 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 BPIFA2Q96DR5 249 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 PRRC1Q96M27 445 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 SH3GL1Q99961 368 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 RACGAP1Q9H0H5 632 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 ZNF275Q9NSD4 429 aaPredicted RBP11.22□□□□□ -0.61
DDX41-204ENST00000504807 SLC7A8Q9UHI5 535 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 DUSP13Q9UII6 198 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 MED31Q9Y3C7 131 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 CACNG2Q9Y698 323 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 VWFP04275 2813 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 IGLV3-9A0A075B6K5 115 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 A0A1W2PRG6 482 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 ELOVL7A1L3X0 281 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 H7C1C5 153 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 VENTXO95231 258 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 COX4I1P13073 169 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 ZNF32P17041 273 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 MPV17P39210 176 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
DDX41-204ENST00000504807 SLC7A2P52569 658 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 CDH15P55291 814 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 LCN6P62502 163 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 GLO1Q04760 184 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 NRMQ8IXM6 262 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 FAM86B1Q8N7N1 296 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 OR51A7Q8NH64 312 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 CLDND2Q8NHS1 167 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
DDX41-204ENST00000504807 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.61
DDX41-204ENST00000504807 POLR2J3Q9H1A7 115 aaKnown RBP11.21□□□□□ -0.61
DDX41-204ENST00000504807 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 TXNIPQ9H3M7 391 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 DENND2DQ9H6A0 471 aaPredicted RBP11.21□□□□□ -0.61
DDX41-204ENST00000504807 RNF121Q9H920 327 aa11.21□□□□□ -0.61
DDX41-204ENST00000504807 A0A087WUU8 490 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 MCIDASD6RGH6 385 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 CXCR6O00574 342 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 SNAP29O95721 258 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 IGHMP01871 453 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 THRBP10828 461 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 ZNF250P15622 560 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 GSK3BP49841 420 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 DAP3P51398 398 aaKnown RBP11.2□□□□□ -0.62
DDX41-204ENST00000504807 CHN2P52757 468 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 ERVK-25P63136 954 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 MRPS34P82930 218 aaKnown RBP11.2□□□□□ -0.62
DDX41-204ENST00000504807 PSG4Q00888 419 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 GALK2Q01415 458 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 ENDOGQ14249 297 aaKnown RBP11.2□□□□□ -0.62
DDX41-204ENST00000504807 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 ALG10Q5BKT4 473 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 UGT2A3Q6UWM9 527 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 FOXL2NBQ6ZUU3 175 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 RFPL4BQ6ZWI9 263 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 CBLL1Q75N03 491 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 HSH2DQ96JZ2 352 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 POM121L2Q96KW2 1035 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 POFUT1Q9H488 388 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 GID8Q9NWU2 228 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 TAAR3PQ9P1P4 343 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 ADAM18Q9Y3Q7 739 aa11.2□□□□□ -0.62
DDX41-204ENST00000504807 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 CDC14BO60729 498 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 ZNF682O95780 498 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 SERPINA1P01009 418 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 NGFP01138 241 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 LCKP06239 509 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 LAP3P28838 519 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 SRP14P37108 136 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms