RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 AGBL5Q8NDL9 886 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR2T33Q8NG76 320 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR4F15Q8NGB8 312 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR51L1Q8NGJ5 315 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR4Q3Q8NH05 313 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SYNPRQ8TBG9 265 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF596Q8TC21 504 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 LKAAEAR1Q8TD35 194 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TRAPPC12Q8WVT3 735 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SLC6A18Q96N87 628 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ATF6BQ99941 703 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CHST5Q9GZS9 411 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 RAB6CQ9H0N0 254 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SRMSQ9H3Y6 488 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SMOC1Q9H4F8 434 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZDHHC6Q9H6R6 413 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SLC17A6Q9P2U8 582 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TRPC4Q9UBN4 977 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 LRFN2Q9ULH4 789 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TNFSF18Q9UNG2 199 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 JAG2Q9Y219 1238 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 HES2Q9Y543 173 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PRRC2AP48634 2157 aaKnown RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 SEC16AO15027 2179 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 DUXAA6NLW8 204 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 OR52A4PA6NMU1 304 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 C9JVG2 144 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 FTCDNL1E5RQL4 147 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 G3V3Q6 166 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 K7ERQ8 282 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 CYB5AP00167 134 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF888P0CJ79 500 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF35P13682 527 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 DLSTP36957 453 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 CCR6P51684 374 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 MEF2AQ02078 507 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 OC90Q02509 493 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ROM1Q03395 351 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 RGNQ15493 299 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ACOT6Q3I5F7 207 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SYPL2Q5VXT5 272 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 LYPD4Q6UWN0 246 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SLCO4C1Q6ZQN7 724 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SLC26A10Q8NG04 563 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 OR11G2Q8NGC1 345 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 OR2G2Q8NGZ5 317 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 PPCDCQ96CD2 204 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ACY3Q96HD9 319 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 GMPPAQ96IJ6 420 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ADGRG7Q96K78 797 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 PRRC1Q96M27 445 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 CD180Q99467 661 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 GGACTQ9BVM4 153 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 ACTR3CQ9C0K3 210 aaPredicted RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 PTGES2Q9H7Z7 377 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SEMA4GQ9NTN9 838 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SLCO1C1Q9NYB5 712 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 DOK5Q9P104 306 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 LRFN1Q9P244 771 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 SH3BGRL2Q9UJC5 107 aa2.53□□□□□ -2.01
NEDD4-204ENST00000503468 YBX2Q9Y2T7 364 aaKnown RBP2.53□□□□□ -2.01
NEDD4-204ENST00000503468 CCL15-CCL14A0A0B4J2E2 113 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 C7orf77A4D0Y5 90 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 GJE1A6NN92 205 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM72CH0Y354 149 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SULT2B1O00204 365 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 LDB3O75112 727 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CST4P01036 141 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 HPXP02790 462 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 VTNP04004 478 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MMP7P09237 267 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SEC11BP0C7V7 166 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NDUFS1P28331 727 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NSG1P42857 185 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CTSCP53634 463 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 KLF3P57682 345 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CARD18P57730 90 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 MRPS21P82921 87 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CACNG1Q06432 222 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CPSF6Q16630 551 aaKnown RBP eCLIP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 CCL15Q16663 113 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM241Q24JQ0 296 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 COL5A1-AS1Q5SY13 56 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM72AQ5TYM5 149 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 LIPNQ5VXI9 398 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM71E1Q6IPT2 247 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM72DQ6L9T8 149 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 C11orf87Q6NUJ2 197 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 B3GLCTQ6Y288 498 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 FAM72BQ86X60 149 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 IZUMO1Q8IYV9 350 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ARRDC1Q8N5I2 433 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ACVR1CQ8NER5 493 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 NFAM1Q8NET5 270 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR1S2Q8NGQ3 325 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 RNASEH2CQ8TDP1 164 aaKnown RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR5P2Q8WZ92 322 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 ZBTB45Q96K62 511 aaPredicted RBP2.52□□□□□ -2.01
NEDD4-204ENST00000503468 SLC22A12Q96S37 553 aa2.52□□□□□ -2.01
NEDD4-204ENST00000503468 OR51B6Q9H340 312 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms