RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ZNF805Q5CZA5 627 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 C10orf91Q5T1B1 145 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 C9orf131Q5VYM1 1079 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ANKRD16Q6P6B7 361 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 MCEMP1Q8IX19 187 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 CLDN19Q8N6F1 224 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF738Q8NE65 137 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF417Q8TAU3 575 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 UBTD2Q8WUN7 234 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 DYRK2Q92630 601 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF385AQ96PM9 386 aaKnown RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 BARX1Q9HBU1 254 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SOHLH2Q9NX45 425 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TIMM10BQ9Y5J6 103 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SHISA3A0PJX4 238 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 C9J4A7 227 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 G3V3Q6 166 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 GEMIN2O14893 280 aaKnown RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 NPM3O75607 178 aaKnown RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 WISP3O95389 354 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 CD14P08571 375 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ACVR1Q04771 509 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 UPP1Q16831 310 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 MS4A13Q5J8X5 152 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 PRAMEF14Q5SWL7 426 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 PSRC1Q6PGN9 363 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SLC16A14Q7RTX9 510 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 NRMQ8IXM6 262 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SP8Q8IXZ3 490 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 GCNT2Q8N0V5 402 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 OR5K2Q8NHB8 316 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SFXN5Q8TD22 340 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 LKAAEAR1Q8TD35 194 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 OR5P2Q8WZ92 322 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 PPP1R16AQ96I34 528 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ALKBH7Q9BT30 221 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 GPR174Q9BXC1 333 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 EPHX3Q9H6B9 360 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SLC2A9Q9NRM0 540 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 PRODH2Q9UF12 536 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 FOXJ3Q9UPW0 622 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 AMDHD2Q9Y303 409 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF337Q9Y3M9 751 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TRBV11-1A0A0K0K1C0 115 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 F6UZH7 168 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 MASP2O00187 686 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ERAL1O75616 437 aaKnown RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ADRA2AP08913 450 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 CHRNB4P30926 498 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 CDKN1CP49918 316 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 YOD1Q5VVQ6 348 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 NIPAL3Q6P499 406 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TMEM99Q8N816 258 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 SLC26A10Q8NG04 563 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 OR4A4PQ8NGN8 299 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 RGP1Q92546 391 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 MYADMQ96S97 322 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 DMRTA2Q96SC8 542 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 MCHR1Q99705 422 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TCFL5Q9UL49 500 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ADAMTS5Q9UNA0 930 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 C14orf166Q9Y224 244 aaKnown RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF281Q9Y2X9 895 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 EVPLQ92817 2033 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 TANC1Q9C0D5 1861 aa7.5□□□□□ -1.21
CRNKL1-205ENST00000496549 CCDC163A0A0D9SF12 145 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 C22orf31O95567 290 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 CD8AP01732 235 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 LAMP2P13473 410 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 F3P13726 295 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 LIM2P55344 173 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 TGM3Q08188 693 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 ENTPD8Q5MY95 495 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 CTSL3PQ5NE16 218 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 PRR27Q6MZM9 219 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 RPTNQ6XPR3 784 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF66Q6ZN08 573 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 GPRIN1Q7Z2K8 1008 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 GRINAQ7Z429 371 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 MRPL52Q86TS9 123 aaKnown RBP7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 PIANPQ8IYJ0 282 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 UMODL1-AS1Q8N2C9 162 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 PRR18Q8N4B5 295 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 SUN3Q8TAQ9 357 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 ADIPOR1Q96A54 375 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 PRAP1Q96NZ9 151 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 MESP1Q9BRJ9 268 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 SNHG12Q9BXW3 62 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
CRNKL1-205ENST00000496549 FBXO4Q9UKT5 387 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms