RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SPARCP09486 303 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 NAT1P18440 290 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 PRKACBP22694 351 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 ARHGAP40Q5TG30 622 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 OR2AK2Q8NG84 335 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 TNFAIP8L1Q8WVP5 186 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 RLN3Q8WXF3 142 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 TCRBV16S1A1N1A0A5B0 115 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 SLC16A7O60669 478 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 MPZL1O95297 269 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 DRD1P21728 446 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 CXCR1P25024 350 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 FAUP35544 74 aaKnown RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 PPICP45877 212 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 GABRA4P48169 554 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 SKP1P63208 163 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 MRPS21P82921 87 aaKnown RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 ACKR1Q16570 336 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 Q6ZS52 159 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 PRSS58Q8IYP2 241 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 KDM8Q8N371 416 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 OR1J4Q8NGS1 313 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 METTL21AQ8WXB1 218 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 TCTN2Q96GX1 697 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 TMPRSS13Q9BYE2 586 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 ADAM19Q9H013 955 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 MRPL22Q9NWU5 206 aaKnown RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-217ENST00000495688 KIF25Q9UIL4 384 aa11.74□□□□□ -0.53
PTPN7-217ENST00000495688 XKRYO14609 159 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM127O75204 238 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CTLA4P16410 223 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 PRSS3P35030 304 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CAPZBP47756 277 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 INSM1Q01101 510 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 ZP2Q05996 745 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 SLC17A1Q14916 467 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 EMC4Q5J8M3 183 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR10K2Q6IF99 312 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 RGS7BPQ6MZT1 257 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 C11orf88Q6PI97 169 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 TTLL10Q6ZVT0 673 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 PRSS42Q7Z5A4 293 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM151BQ8IW70 566 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR51A2Q8NGJ7 313 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR6N1Q8NGY5 312 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 DUSP19Q8WTR2 217 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 C15orf40Q8WUR7 153 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF578Q96N58 590 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 MS4A7Q9GZW8 240 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 EXO5Q9H790 373 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 LANCL2Q9NS86 450 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 B9D1Q9UPM9 204 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 UNC13CQ8NB66 2214 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 F5H5P2 479 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 M0QYG6 137 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 IGF2P01344 180 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 BGLAPP02818 100 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CSF1P09603 554 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CSF2RBP32927 897 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 SORDQ00796 357 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 RAB11BQ15907 218 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 B3GNTL1Q67FW5 361 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CLEC1AQ8NC01 280 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 EXOSC3Q9NQT5 275 aaKnown RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 DHCR7Q9UBM7 475 aaKnown RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF230Q9UIE0 474 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM14AQ9Y6G1 99 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR6C65A6NJZ3 312 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 RP2O75695 350 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 HOXD4P09016 255 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 GABRA1P14867 456 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 C4BPBP20851 252 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 FOXL2P58012 376 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 BIKQ13323 160 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 STEAP1BQ6NZ63 245 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 TMED4Q7Z7H5 227 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 ADIPOR1Q96A54 375 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 CCNL2Q96S94 520 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-217ENST00000495688 OR11A1Q9GZK7 315 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
PTPN7-217ENST00000495688 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 DCDC2BA2VCK2 349 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 PRSS37A4D1T9 235 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 SLC17A2O00624 439 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms