RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CPSF4LA6NMK7 179 aaKnown RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 EVPLLA8MZ36 301 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 KPNA4O00629 521 aaPredicted RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 TPST2O60704 377 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 SNNO75324 88 aaPredicted RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 UBOX5O94941 541 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 RNASE1P07998 156 aaKnown RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 MMP15P51511 669 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 ZNF154Q13106 437 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 PABPC1L2AQ5JQF8 200 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 HDDC2Q7Z4H3 204 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 NANOGNBQ7Z5D8 188 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 BCL6BQ8N143 479 aaPredicted RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 IPCEF1Q8WWN9 437 aaPredicted RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 OR52B2Q96RD2 323 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 ZNF347Q96SE7 839 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 SLC19A3Q9BZV2 496 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 SLITRK2Q9H156 845 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 MMP26Q9NRE1 261 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 SLC25A37Q9NYZ2 338 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 CGGBP1Q9UFW8 167 aaPredicted RBP12.06□□□□□ -0.48
VARS-228ENST00000495010 EGFL7Q9UHF1 273 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 ZNF229Q9UJW7 825 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 ANGPT4Q9Y264 503 aa12.06□□□□□ -0.48
VARS-228ENST00000495010 BLOC1S5-TXNDC5H3BN57 136 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 M0R3H8 397 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 FMO6PO60774 539 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 IGHMP01871 453 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 MPV17P39210 176 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 MTNR1AP48039 350 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 TNFAIP6P98066 277 aaPredicted RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 ENTPD8Q5MY95 495 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 LRIF1Q5T3J3 769 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 MBNL2Q5VZF2 373 aaKnown RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 LINC00114Q6XXX2 140 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 C1orf174Q8IYL3 243 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 SMYD1Q8NB12 490 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 SYT14Q8NB59 555 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 SLC25A40Q8TBP6 338 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 KLF14Q8TD94 323 aaPredicted RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 GEMIN6Q8WXD5 167 aaKnown RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 MARS2Q96GW9 593 aaKnown RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 WFDC6Q9BQY6 131 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 OR2J1Q9GZK6 312 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 TMEM38AQ9H6F2 299 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 SIAEQ9HAT2 523 aa12.05□□□□□ -0.48
VARS-228ENST00000495010 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.05□□□□□ -0.48
VARS-228ENST00000495010 ZSCAN5BA6NJL1 495 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ZNF12P17014 697 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 HOXB9P17482 250 aaPredicted RBP12.04□□□□□ -0.48
VARS-228ENST00000495010 TNFSF4P23510 183 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 PCGF2P35227 344 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ARHGDIAP52565 204 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 SGCAQ16586 387 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 HIST3H3Q16695 136 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ZNF101Q8IZC7 436 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ABHD4Q8TB40 342 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 PATZ1Q9HBE1 687 aaKnown RBP12.04□□□□□ -0.48
VARS-228ENST00000495010 NPHS2Q9NP85 383 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 OR5V1Q9UGF6 321 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 SLC7A7Q9UM01 511 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 INSIG2Q9Y5U4 225 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
VARS-228ENST00000495010 CENPBD1B2RD01 187 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 CLDN34H7C241 214 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 TIMM8AO60220 97 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 IGHV2-70P01814 119 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 F13BP05160 661 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 CD55P08174 381 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ADH4P08319 380 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ACADSP16219 412 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ZNF32P17041 273 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 TNFRSF1AP19438 455 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 CDAP32320 146 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 WNT5AP41221 380 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 DAP3P51398 398 aaKnown RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 PPP1CBP62140 327 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 MRPS34P82930 218 aaKnown RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 TAF11Q15544 211 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 SLC9A3R2Q15599 337 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ESCO2Q56NI9 601 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
VARS-228ENST00000495010 LEG1Q6P5S2 330 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ARL9Q6T311 187 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 SPATC1Q76KD6 591 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 ZER1Q7Z7L7 766 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 CROCCP2Q86T23 111 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 MSRB3Q8IXL7 192 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 C10orf111Q8N326 155 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 MREGQ8N565 214 aa12.03□□□□□ -0.48
VARS-228ENST00000495010 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms