RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CENPBD1B2RD01 187 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 HLA-DQA2P01906 255 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 EIF4EP06730 217 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PGA4P0DJD7 388 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PGA3P0DJD8 388 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 EPXP11678 715 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PTBP1P26599 531 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 FKBP2P26885 142 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 APEX1P27695 318 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 RFX2P48378 723 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR2B6P58173 313 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 B3GALT5-AS1P59052 145 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ADAM8P78325 824 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 H3F3AP84243 136 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 GLO1Q04760 184 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 MADCAM1Q13477 382 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 TMEM176BQ3YBM2 270 aaPredicted RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 HSD17B12Q53GQ0 312 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ACER2Q5QJU3 275 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SLC18B1Q6NT16 456 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ZNF679Q8IYX0 411 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR8H2Q8N162 312 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR1J4Q8NGS1 313 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR10AC1Q8NH08 325 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SETD6Q8TBK2 473 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ST7LQ8TDW4 575 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SNRNP27Q8WVK2 155 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ASB17Q8WXJ9 295 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SLC39A7Q92504 469 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 HTRA1Q92743 480 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 GPR87Q9BY21 358 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ELOVL3Q9HB03 270 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 CYSLTR2Q9NS75 346 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ETAA1Q9NY74 926 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 NCOA6Q14686 2063 aaPredicted RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 TRBV5-7A0A0A0MS05 114 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ANKRD61A6NGH8 418 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 NOTOA8MTQ0 251 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 C21orf140B9A014 251 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SLC19A2O60779 497 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 TMCC2O75069 709 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ZNF254O75437 659 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SRSF10O75494 262 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 KHDRBS3O75525 346 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PMS2P2O95744 297 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PAHP00439 452 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PNPP00491 289 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 HLA-DQB1P01920 261 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 HRGP04196 525 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ZNF17P17021 662 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 DLSTP36957 453 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 DNASE1L1P49184 302 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 Q499Y3 187 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 WDR38Q5JTN6 314 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 DNM1P34Q6PK57 102 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 TMPPEQ6ZT21 453 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 GLRX5Q86SX6 157 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 UEVLDQ8IX04 471 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 CADM3Q8N126 398 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 BEST3Q8N1M1 668 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 ZNF454Q8N9F8 522 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 NOXO1Q8NFA2 376 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 IL17RDQ8NFM7 739 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR5H6Q8NGV6 325 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR52N5Q8NH56 324 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OR5AK2Q8NH90 309 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 RNF128Q8TEB7 428 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 NSMAFQ92636 917 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 PPP1R14BQ96C90 147 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 OXGR1Q96P68 337 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 SLC25A18Q9H1K4 315 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 DEPPQ9NTK1 212 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 MALT1Q9UDY8 824 aa9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 MRPS18BQ9Y676 258 aaKnown RBP9.48□□□□□ -0.89
PRPF4B-209ENST00000494674 A0A0B4J203 849 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 TMEM212A6NML5 194 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 SULT2B1O00204 365 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 CBR3O75828 277 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 SRMP19623 302 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 CCR9P51686 369 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 DEFA1P59665 94 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 DEFA3P59666 94 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 SLC35A1P78382 337 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 MFGE8Q08431 387 aaPredicted RBP9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 ASAH1Q13510 395 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 EIF2B1Q14232 305 aaKnown RBP9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 CSRP2Q16527 193 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 HIST3H3Q16695 136 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 ZNF554Q86TJ5 538 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 LRRC28Q86X40 367 aaPredicted RBP9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 SAMD12Q8N8I0 201 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 OR4M1Q8NGD0 313 aa9.47□□□□□ -0.89
PRPF4B-209ENST00000494674 OR51A4Q8NGJ6 313 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms