RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 TMEM53Q6P2H8 277 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 DNM1P46Q6ZS02 220 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ZDHHC21Q8IVQ6 265 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ARIH2OSQ8N7S6 290 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 BCAS4Q8TDM0 211 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ZNF570Q96NI8 536 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 RBP7Q96R05 134 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 REG4Q9BYZ8 158 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 DENND2DQ9H6A0 471 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ZNF442Q9H7R0 627 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 GRHPRQ9UBQ7 328 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 SIGLEC7Q9Y286 467 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 FN1P02751 2386 aaKnown RBP12.69□□□□□ -0.38
ATG4B-224ENST00000494132 TEX13CA0A0J9YWL9 993 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 A6NIZ1 184 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 OR10H3O60404 316 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 PTP4A3O75365 173 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 NDUFB2O95178 105 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 SERPINA5P05154 406 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 MMP7P09237 267 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-224ENST00000494132 BMP4P12644 408 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 APEX1P27695 318 aaKnown RBP12.68□□□□□ -0.38
ATG4B-224ENST00000494132 LAP3P28838 519 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 RAP1BP61224 184 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 RAP1AP62834 184 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 MRPS34P82930 218 aaKnown RBP12.68□□□□□ -0.38
ATG4B-224ENST00000494132 MS4A2Q01362 244 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 GALK2Q01415 458 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-224ENST00000494132 CARTPTQ16568 116 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 ANKDD1AQ495B1 522 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 FAM122BQ7Z309 247 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 ZER1Q7Z7L7 766 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 SYT3Q9BQG1 590 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 MRPL37Q9BZE1 423 aaKnown RBP12.68□□□□□ -0.38
ATG4B-224ENST00000494132 PLK3Q9H4B4 646 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 RERGLQ9H628 205 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 SMURF2Q9HAU4 748 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 ACTR3BQ9P1U1 418 aa12.68□□□□□ -0.38
ATG4B-224ENST00000494132 TCRBV5S2A0A599 114 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 TMEM129A0AVI4 362 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 SOCS2O14508 198 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 XKRYO14609 159 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 MGRN1O60291 552 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 UBOX5O94941 541 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 PPP1R3DO95685 299 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 SCG5P05408 212 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 HEXAP06865 529 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 CCNOP22674 350 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 EFNA4P52798 201 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 HSF2Q03933 536 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 KRR1Q13601 381 aaKnown RBP12.67□□□□□ -0.38
ATG4B-224ENST00000494132 EFNB3Q15768 340 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 SPATS1Q496A3 300 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 PABPC1L2AQ5JQF8 200 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 THEM4Q5T1C6 240 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 CLEC2AQ6UVW9 174 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 UGT2A3Q6UWM9 527 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 ICA1LQ8NDH6 482 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 FANK1Q8TC84 345 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 RHNO1Q9BSD3 238 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 TPK1Q9H3S4 243 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 SIAEQ9HAT2 523 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 CDH20Q9HBT6 801 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 DYNLRB1Q9NP97 96 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 EMC7Q9NPA0 242 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 CCNB1IP1Q9NPC3 277 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 IL1RAPQ9NPH3 570 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 KRCC1Q9NPI7 259 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-224ENST00000494132 TAS2R1Q9NYW7 299 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 MYEF2Q9P2K5 600 aaKnown RBP12.67□□□□□ -0.38
ATG4B-224ENST00000494132 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 IER3IP1Q9Y5U9 82 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 NAV3Q8IVL0 2385 aa12.67□□□□□ -0.38
ATG4B-224ENST00000494132 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 ENTPD5O75356 428 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 IGFBP1P08833 259 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-224ENST00000494132 NR2C1P13056 603 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 CTLA4P16410 223 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 GLRXP35754 106 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 PLP2Q04941 152 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
ATG4B-224ENST00000494132 MAD2L1BPQ15013 274 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-224ENST00000494132 ALKBH6Q3KRA9 238 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 NRN1LQ496H8 165 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 LCN8Q6JVE9 175 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 TRPM8Q7Z2W7 1104 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 DHFR2Q86XF0 187 aa12.66□□□□□ -0.38
ATG4B-224ENST00000494132 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms