RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 HIF1ANQ9NWT6 349 aa17.57■□□□□ 0.4
COL27A1-207ENST00000494090 N4BP2Q86UW6 1770 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 A0A0B4J2A0 478 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF891A8MT65 544 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 I6L893 689 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 CHRM2P08172 466 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 LGALS4P56470 323 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 SLC51BQ86UW2 128 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 OR10K1Q8NGX5 313 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 CSF3RQ99062 836 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 BARHL1Q9BZE3 327 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 SHPKQ9UHJ6 478 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 RFXAPO00287 272 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 TMPRSS11DO60235 418 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 TPPPO94811 219 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 CALCBP10092 127 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 MRPL19P49406 292 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 SMAD4Q13485 552 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 FAHD1Q6P587 224 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 OR6C65A6NJZ3 312 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 G3V3Y1 287 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 GSTP1P09211 210 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 MAP2K6P52564 334 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 FGGYQ96C11 551 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 INTS12Q96CB8 462 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 TCEAL7Q9BRU2 100 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 GABARAPH6UMI1 98 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 PRKACAP17612 351 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 RPL27P61353 136 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM240Q5SV17 173 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.56■□□□□ 0.4
COL27A1-207ENST00000494090 SECTM1Q8WVN6 248 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 KIRREL1Q96J84 757 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 CMC2Q9NRP2 79 aa17.56■□□□□ 0.4
COL27A1-207ENST00000494090 TLE4Q04727 773 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 DUSP8Q13202 625 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 OR8B8Q15620 311 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 NAXDQ8IW45 347 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 KCNJ15Q99712 375 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 CTRCQ99895 268 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 BCL2L10Q9HD36 194 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 OR51A2Q8NGJ7 313 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 SPACA1Q9HBV2 294 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 DUSP13Q9UII6 198 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 TNFSF12O43508 249 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 MVB12AQ96EY5 273 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 ENSAO43768 121 aaKnown RBP17.55■□□□□ 0.4
COL27A1-207ENST00000494090 NSA2O95478 260 aaKnown RBP17.55■□□□□ 0.4
COL27A1-207ENST00000494090 ELK1P19419 428 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 ACHEP22303 614 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 C11orf91Q3C1V1 193 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 FCRL6Q6DN72 434 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 SYT9Q86SS6 491 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 SLC25A19Q9HC21 320 aa17.55■□□□□ 0.4
COL27A1-207ENST00000494090 KLF13Q9Y2Y9 288 aaPredicted RBP17.55■□□□□ 0.4
COL27A1-207ENST00000494090 FZD6O60353 706 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 PTOV1Q86YD1 416 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM99Q8N816 258 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 HSD17B8Q92506 261 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 CCDC74AQ96AQ1 378 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 YIPF6Q96EC8 236 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 UBE2ZQ9H832 354 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 BOLA1Q9Y3E2 137 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 PMS2P1A4D2B8 440 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 SMLR1H3BR10 107 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 M0QYG6 137 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 DOK2O60496 412 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 IGFBP1P08833 259 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 RAB4AP20338 218 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 ZNF74Q16587 644 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 PAN3Q58A45 887 aaKnown RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 ANKRD34AQ69YU3 496 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 DOK3Q7L591 496 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 TEX19Q8NA77 164 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 DVL3Q92997 716 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 MYEOVQ96EZ4 313 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 THOC3Q96J01 351 aaKnown RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 PDCD1LG2Q9BQ51 273 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 HINT3Q9NQE9 182 aaKnown RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 AKR1C1Q04828 323 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 DBPQ10586 325 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 ATPAF1Q5TC12 328 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 RNF141Q8WVD5 230 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 SLC6A17Q9H1V8 727 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 TBC1D29Q9UFV1 150 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 H0YIG0 161 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-207ENST00000494090 CD22P20273 847 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 HNF4GQ14541 408 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 HMGN3Q15651 99 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 EMC4Q5J8M3 183 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 HEPHL1Q6MZM0 1159 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 MDGA2Q7Z553 956 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 TMEM179BQ7Z7N9 219 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 PLPP7Q8NBV4 271 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 TIMD4Q96H15 378 aa17.54■□□□□ 0.4
COL27A1-207ENST00000494090 NECAP2Q9NVZ3 263 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms