RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C6P13671 934 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 NID1P14543 1247 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZBTB25P24278 435 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 LAP3P28838 519 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 LPAR6P43657 344 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 HTR5AP47898 357 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TBC1D3GQ6DHY5 549 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PARS2Q7L3T8 475 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ADIPOR2Q86V24 386 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PPP1R3BQ86XI6 285 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 FAM24BQ8N5W8 94 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 BHLHE23Q8NDY6 225 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 OR5K2Q8NHB8 316 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ADAD1Q96M93 576 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 RNF126Q9BV68 326 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TMPRSS5Q9H3S3 457 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CAPN10Q9HC96 672 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1B0GWA3 101 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 C9orf170A2RU37 121 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 RHPN2P1A8MT19 583 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 AP4M1O00189 453 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PHYHO14832 338 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CYB5AP00167 134 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 INHAP05111 366 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 AKR1C4P17516 323 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ID2Q02363 134 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 EIF2B1Q14232 305 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF585AQ6P3V2 769 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PLPP7Q8NBV4 271 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 SECTM1Q8WVN6 248 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 GTF3AQ92664 365 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 UFSP2Q9NUQ7 469 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 IL36AQ9UHA7 158 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 IKZF2Q9UKS7 526 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CCL26Q9Y258 94 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 SCN5AQ14524 2016 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 FITM1A5D6W6 292 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 H0YIZ8 118 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 VEGFDO43915 354 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 NDUFB2O95178 105 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ARG1P05089 322 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 RAB5AP20339 215 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 OTPQ5XKR4 325 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 AMZ2Q86W34 360 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF619Q8N2I2 560 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM229BQ8NBD8 167 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 TOLLIPQ9H0E2 274 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 RXFP3Q9NSD7 469 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ATXN7L1Q9ULK2 861 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 TRBV5-5A0A0J9YX44 114 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 LEFTY2O00292 366 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 CDC40O60508 579 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 CRHP06850 196 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 DBIP07108 87 aaKnown RBP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 THBS1P07996 1170 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ERGP11308 486 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 BTF3P20290 206 aaKnown RBP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 FKBP1BP68106 108 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 BTN3A2P78410 334 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 PRDX1Q06830 199 aaKnown RBP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 CDNFQ49AH0 187 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM35AQ53FP2 167 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 SSX9Q7RTT3 188 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 FAM220AQ7Z4H9 259 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ADAD2Q8NCV1 583 aaKnown RBP10.6□□□□□ -0.71
HDAC4-210ENST00000493582 OR2A1Q8NGT9 310 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 PHB2Q99623 299 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 ALG12Q9BV10 488 aa10.6□□□□□ -0.71
HDAC4-210ENST00000493582 C7orf77A4D0Y5 90 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MED6O75586 246 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ERCC1P07992 297 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 PAX6P26367 422 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SERPINF1P36955 418 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 CSNK1EP49674 416 aaKnown RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 NTHL1P78549 312 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ELOCQ15369 112 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ALG11Q2TAA5 492 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ALG10BQ5I7T1 473 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 DCST2Q5T1A1 773 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 LINC01590Q5TEZ4 76 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZAR1Q86SH2 424 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF761Q86XN6 746 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SHISA5Q8N114 240 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF383Q8NA42 475 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 OR2L5Q8NG80 312 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 OR10H5Q8NGA6 315 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 MITD1Q8WV92 249 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SUSD6Q92537 303 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 KIRREL1Q96J84 757 aa10.59□□□□□ -0.71
HDAC4-210ENST00000493582 SDHAF3Q9NRP4 125 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms