RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SYT5O00445 386 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 EPPINO95925 133 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 CD8BP10966 210 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 IFI30P13284 250 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ELK1P19419 428 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 COL8A1P27658 744 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 UQCRC1P31930 480 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 BDH1Q02338 343 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PMPCAQ10713 525 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 GPR68Q15743 365 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 MAPK14Q16539 360 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 AADACL4Q5VUY2 407 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PRAMEF8Q5VWM4 474 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PRAMEF7Q5VXH5 474 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HBMQ6B0K9 141 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 CBLN3Q6UW01 205 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PLXDC2Q6UX71 529 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SEM1Q6ZVN7 128 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 HMGN2P46Q86SG4 172 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 OR8H1Q8NGG4 311 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PIGXQ8TBF5 258 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 SPRYD4Q8WW59 207 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PRDM14Q9GZV8 571 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF350Q9GZX5 532 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 ABCG5Q9H222 651 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PTTG3PQ9NZH4 202 aa8.42□□□□□ -1.06
BRCA1-219ENST00000491747 EXOGQ9Y2C4 368 aaKnown RBP8.42□□□□□ -1.06
BRCA1-219ENST00000491747 PTPN13Q12923 2485 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 DOPEY1Q5JWR5 2465 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 LEUTXA8MZ59 168 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 SCDO00767 359 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 SURF4O15260 269 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 SHOXO15266 292 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 FABP7O15540 132 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 CHP2O43745 196 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 TSC22D2O75157 780 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 SOX30O94993 753 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 CHRM4P08173 479 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 GLI4P10075 376 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 STOMP27105 288 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 HTR1FP30939 366 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 LHX2P50458 406 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF117Q03924 483 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 GPR176Q14439 515 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 IDNKQ5T6J7 187 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 HACD4Q5VWC8 232 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF322Q6U7Q0 402 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 RPTNQ6XPR3 784 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 FRRS1Q6ZNA5 592 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 C16orf62Q7Z3J2 963 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 OR4M2Q8NGB6 313 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ARSGQ96EG1 525 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 FAM46AQ96IP4 442 aaKnown RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 THAP7Q9BT49 309 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 JAM3Q9BX67 310 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 CYSLTR2Q9NS75 346 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 IL20Q9NYY1 176 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 CAMK2AQ9UQM7 478 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 A0A0A6YYJ9 748 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 GTPBP1O00178 669 aaKnown RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 WDR1O75083 606 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 STX11O75558 287 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 TOXO94900 526 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 CH25HO95992 272 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ACTL6AO96019 429 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 HPGDP15428 266 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 PAICSP22234 425 aaKnown RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 FPR3P25089 353 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ADH7P40394 386 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 OMPP47874 163 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 PITPNBP48739 271 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF141Q15928 474 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 PLA1AQ53H76 456 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF311Q5JNZ3 666 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 C1orf185Q5T7R7 199 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 FAM205BPQ63HN1 556 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 IDO2Q6ZQW0 420 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 MEX3DQ86XN8 651 aaKnown RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 KLBQ86Z14 1044 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 PHOSPHO1Q8TCT1 267 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF431Q8TF32 576 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 QRSL1Q9H0R6 528 aaKnown RBP8.41□□□□□ -1.06
BRCA1-219ENST00000491747 VDAC3Q9Y277 283 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF337Q9Y3M9 751 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 HECTD1Q9ULT8 2610 aa8.41□□□□□ -1.06
BRCA1-219ENST00000491747 HCFC1P51610 2035 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 OR2M5A3KFT3 312 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 C7orf66A4D0T2 115 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 CYSRT1A8MQ03 144 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 H0YC42 278 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 RNF13O43567 381 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 AK1P00568 194 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 HMGN1P05114 100 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ANXA3P12429 323 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 CPN1P15169 458 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
BRCA1-219ENST00000491747 AGFG1P52594 562 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms