RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	TMPRSS11F	Q6ZWK6	438 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	PIM3	Q86V86	326 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	SLC38A6	Q8IZM9	456 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	EID3	Q8N140	333 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	FAM89B	Q8N5H3	189 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592		Q8N9G6	341 aa	Predicted RBP	4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	KBTBD8	Q8NFY9	601 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	OR4D5	Q8NGN0	318 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	OR6F1	Q8NGZ6	308 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	ITFG1	Q8TB96	612 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	MRAP	Q8TCY5	172 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	MCOLN3	Q8TDD5	553 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	HCAR2	Q8TDS4	363 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	TMBIM1	Q969X1	311 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	MYLPF	Q96A32	169 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	LGALS12	Q96DT0	336 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	ATXN7L3B	Q96GX2	97 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	RNF145	Q96MT1	663 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	CCDC115	Q96NT0	180 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	OR5B2	Q96R09	309 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	IL4I1	Q96RQ9	567 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	P2RY13	Q9BPV8	354 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	DUSP16	Q9BY84	665 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	SLIRP	Q9GZT3	109 aa	Known RBP	4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	SLC52A3	Q9NQ40	469 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	ZC4H2	Q9NQZ6	224 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	GSN-AS1	Q9NRJ2	163 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	TAS2R9	Q9NYW1	312 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	LHX3	Q9UBR4	397 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	PSORS1C1	Q9UIG5	152 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	SLC22A13	Q9Y226	551 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	TRAPPC4	Q9Y296	219 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	GSTK1	Q9Y2Q3	226 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	HES2	Q9Y543	173 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	PARP14	Q460N5	1801 aa		4.22	□□□□□ -1.73
RTN4-215	ENST00000491592	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.21	□□□□□ -1.73
RTN4-215	ENST00000491592	NRXN2	Q9P2S2	1712 aa		4.21	□□□□□ -1.73
RTN4-215	ENST00000491592		A0A0U1RQF3	1178 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GNG14	A0A1W2PPG7	69 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	FAM92A	A1XBS5	289 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	EFCAB10	A6NFE3	127 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	SHISA7	A6NL88	538 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592		A8MX80	341 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	C2orf74	A8MZ97	194 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592		B4DGG1	531 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592		H3BTX0	84 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GNGT2	O14610	69 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GOSR2	O14653	212 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	AZIN1	O14977	448 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ATP6AP2	O75787	350 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	KCNK2	O95069	426 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ANGPTL1	O95841	491 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GIMD1	P0DJR0	217 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	CT45A8	P0DMV1	189 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	CT45A9	P0DMV2	189 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ATP1B2	P14415	290 aa	Predicted RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GOT1	P17174	413 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	SRD5A1	P18405	259 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GGT1	P19440	569 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	PMCH	P20382	165 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	EFNA1	P20827	205 aa	Predicted RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ERP29	P30040	261 aa	Known RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ACVR1B	P36896	505 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	AQP2	P41181	271 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	CAPZB	P47756	277 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	POLR2J	P52435	117 aa	Known RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	AP2S1	P53680	142 aa	Predicted RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	CDH12	P55289	794 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	MLF1	P58340	268 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	TAS2R39	P59534	338 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	OSTN	P61366	133 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ERVK-8	P63133	956 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	SLC35A2	P78381	396 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GAGE2B	Q13066	116 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	TWIST1	Q15672	202 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GUK1	Q16774	197 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	DUSP6	Q16828	381 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GPR33	Q49SQ1	333 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GAGE2E	Q4V326	116 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	UNC50	Q53HI1	259 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	RAB6C	Q53S08	254 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	CT45A2	Q5DJT8	189 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ARMCX4	Q5H9R4	360 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF678	Q5SXM1	525 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	TPRG1L	Q5T0D9	272 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ATAD3C	Q5T2N8	411 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	UBE2U	Q5VVX9	321 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	STUM	Q69YW2	141 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	HIST2H2BC	Q6DN03	193 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	HIST2H2BD	Q6DRA6	164 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	GAGE2A	Q6NT46	116 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	RGMB	Q6NW40	437 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	TMPRSS11A	Q6ZMR5	421 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	ZNF767P	Q75MW2	155 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	HDDC2	Q7Z4H3	204 aa		4.21	□□□□□ -1.74
RTN4-215	ENST00000491592	PIGZ	Q86VD9	579 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms