RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 FABP3P05413 133 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 HOXB4P17483 251 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 CALB2P22676 271 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 RRM2P31350 389 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 MNAT1P51948 309 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 MRPS34P82930 218 aaKnown RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 ANKDD1AQ495B1 522 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 SPATS1Q496A3 300 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 HDDC2Q7Z4H3 204 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 ZDHHC21Q8IVQ6 265 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 CPEB3Q8NE35 698 aaKnown RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 IL17RDQ8NFM7 739 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 DOK1Q99704 481 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 REG4Q9BYZ8 158 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 MRPL37Q9BZE1 423 aaKnown RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 RNF121Q9H920 327 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 SIAEQ9HAT2 523 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 SMURF2Q9HAU4 748 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 BARX1Q9HBU1 254 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 IL1RAPQ9NPH3 570 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 TAS2R1Q9NYW7 299 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 MYEF2Q9P2K5 600 aaKnown RBP15.63■□□□□ 0.09
COL9A3-214ENST00000490398 FZR1Q9UM11 496 aa15.63■□□□□ 0.09
COL9A3-214ENST00000490398 ARFGEF3Q5TH69 2177 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 A0A096LNT2 108 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 TEX13CA0A0J9YWL9 993 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 SLC22A23A1A5C7 686 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 UNC119BA6NIH7 251 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 HEXAP06865 529 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 ZNF32P17041 273 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 ITGA2P17301 1181 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 NPR2P20594 1047 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 LAP3P28838 519 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 RIPPLY3P57055 190 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 SNRPD2P62316 118 aaKnown RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 PPP1R8Q12972 351 aaKnown RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 NRN1LQ496H8 165 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 THEM4Q5T1C6 240 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 UGT2A3Q6UWM9 527 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 FOXL2NBQ6ZUU3 175 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 SLC30A7Q8NEW0 376 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 OR10H5Q8NGA6 315 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 RBP7Q96R05 134 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 VRK1Q99986 396 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 OR51B6Q9H340 312 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 DENND2DQ9H6A0 471 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 NRIP3Q9NQ35 241 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 VNN3Q9NY84 501 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 STX18Q9P2W9 335 aaKnown RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 PMF1-BGLAPU3KQ54 211 aa15.62■□□□□ 0.09
COL9A3-214ENST00000490398 FN1P02751 2386 aaKnown RBP15.62■□□□□ 0.09
COL9A3-214ENST00000490398 A6NIZ1 184 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 NDUFB2O95178 105 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 F12P00748 615 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-214ENST00000490398 FAM157BP0CG42 384 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 APEX1P27695 318 aaKnown RBP15.61■□□□□ 0.09
COL9A3-214ENST00000490398 EFNA4P52798 201 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 RAP1BP61224 184 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 RAP1AP62834 184 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 SLC36A2Q495M3 483 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 PABPC1L2AQ5JQF8 200 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 LCN8Q6JVE9 175 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 TMEM53Q6P2H8 277 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 PTCHD4Q6ZW05 846 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 AKR7LQ8NHP1 331 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 BCAS4Q8TDM0 211 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 MCUR1Q96AQ8 359 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 ZNF570Q96NI8 536 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 SYT3Q9BQG1 590 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 EMC7Q9NPA0 242 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 GRHPRQ9UBQ7 328 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 AURKCQ9UQB9 309 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 IER3IP1Q9Y5U9 82 aa15.61■□□□□ 0.09
COL9A3-214ENST00000490398 A0A1W2PPL8 197 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 UBOX5O94941 541 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 PPP1R3DO95685 299 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 CTLA4P16410 223 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 GLRXP35754 106 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 ERVS71-1P61550 626 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 PSG4Q00888 419 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 KRR1Q13601 381 aaKnown RBP15.6■□□□□ 0.09
COL9A3-214ENST00000490398 ENDOGQ14249 297 aaKnown RBP15.6■□□□□ 0.09
COL9A3-214ENST00000490398 TRIM25Q14258 630 aaKnown RBP15.6■□□□□ 0.09
COL9A3-214ENST00000490398 FAM27BQ5VT28 67 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 FAM205BPQ63HN1 556 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 GPX7Q96SL4 187 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-214ENST00000490398 WNT5BQ9H1J7 359 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 CMAHPQ9Y471 501 aa15.6■□□□□ 0.09
COL9A3-214ENST00000490398 CUBNO60494 3623 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 LOC100509620A0A075B734 347 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 PRSS37A4D1T9 235 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 SOCS2O14508 198 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 OR10H3O60404 316 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 BMP4P12644 408 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 CDKN2AP42771 156 aaKnown RBP15.59■□□□□ 0.09
COL9A3-214ENST00000490398 MAGEA2P43356 314 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 MAD2L1BPQ15013 274 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-214ENST00000490398 PGBD2Q6P3X8 592 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 TRPM8Q7Z2W7 1104 aa15.59■□□□□ 0.09
COL9A3-214ENST00000490398 OR9Q2Q8NGE9 314 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms