RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 LYPD3O95274 346 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 PRTN3P24158 256 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 GCH1P30793 250 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 MMP15P51511 669 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 DEFA6Q01524 100 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 HIST3H3Q16695 136 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 PDLIM3Q53GG5 364 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 EPGNQ6UW88 154 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 RBM45Q8IUH3 476 aaKnown RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF101Q8IZC7 436 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 ST7LQ8TDW4 575 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 ADAMTS16Q8TE57 1224 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 LRRC58Q96CX6 371 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 SLCO1B3Q9NPD5 702 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 LEF1Q9UJU2 399 aaPredicted RBP14.37□□□□□ -0.11
TOP3B-217ENST00000489581 SLC7A7Q9UM01 511 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 ANGPT4Q9Y264 503 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 USH1CQ9Y6N9 552 aa14.37□□□□□ -0.11
TOP3B-217ENST00000489581 PLSCR5A0PG75 271 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 ZSCAN5BA6NJL1 495 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 M0QX08 132 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 F13BP05160 661 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 ASAH2BP0C7U1 165 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 STOMP27105 288 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 CDAP32320 146 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 RBMXP38159 391 aaKnown RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 WNT5AP41221 380 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 SLC3A1Q07837 685 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 NRN1LQ496H8 165 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 SPRNQ5BIV9 151 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 TSPYL5Q86VY4 417 aaPredicted RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 BCL6BQ8N143 479 aaPredicted RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 NOXO1Q8NFA2 376 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 GPR32P1Q8NGA4 272 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 OR4D11Q8NGI4 311 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 VANGL1Q8TAA9 524 aaPredicted RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 SLC25A40Q8TBP6 338 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 GEMIN6Q8WXD5 167 aaKnown RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 MARS2Q96GW9 593 aaKnown RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 MRPL13Q9BYD1 178 aaKnown RBP14.36□□□□□ -0.11
TOP3B-217ENST00000489581 KCNN2Q9H2S1 579 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 CCNB1IP1Q9NPC3 277 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 MMP26Q9NRE1 261 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 DCAF16Q9NXF7 216 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF69Q9UC07 566 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF229Q9UJW7 825 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 CORO2BQ9UQ03 480 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
TOP3B-217ENST00000489581 C5orf49A4QMS7 147 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 DNAJC9-AS1A6NH13 148 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 MCIDASD6RGH6 385 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 FOXH1O75593 365 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 TRMUO75648 421 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 SBK2P0C263 348 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 ZNF32P17041 273 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 MRPL19P49406 292 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 PCBP3P57721 371 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 ARMCX4Q5H9R4 360 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 TREML4Q6UXN2 200 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 DOK3Q7L591 496 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 NANOGNBQ7Z5D8 188 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 DEFB108BQ8NET1 73 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 AKR7LQ8NHP1 331 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 KLF14Q8TD94 323 aaPredicted RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 POM121L2Q96KW2 1035 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 C1orf147Q96MC9 270 aaPredicted RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 DCLRE1CQ96SD1 692 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 OR2J1Q9GZK6 312 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 EGLN1Q9GZT9 426 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 UNKLQ9H9P5 680 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 EIF3KQ9UBQ5 218 aaKnown RBP14.35□□□□□ -0.11
TOP3B-217ENST00000489581 NUP50Q9UKX7 468 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 WNK1Q9H4A3 2382 aa14.35□□□□□ -0.11
TOP3B-217ENST00000489581 LOC100509620A0A075B734 347 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 PPIAL4EA0A075B759 164 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 PPIAL4CA0A0B4J2A2 164 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 A0A1W2PRG6 482 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 TRAPPC13A5PLN9 417 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 PPIAL4DF5H284 164 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 POLR3GO15318 223 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-217ENST00000489581 SLC2A10O95528 541 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 PPIAL4FP0DN26 164 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 ACADSP16219 412 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 ATP4BP51164 291 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 RPL18Q07020 188 aaKnown RBP14.34□□□□□ -0.11
TOP3B-217ENST00000489581 BAMBIQ13145 260 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 SGCAQ16586 387 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 TUSC1Q2TAM9 212 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 AGKQ53H12 422 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 KLF17Q5JT82 389 aaPredicted RBP14.34□□□□□ -0.11
TOP3B-217ENST00000489581 CROCCP2Q86T23 111 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 ASB10Q8WXI3 467 aa14.34□□□□□ -0.11
TOP3B-217ENST00000489581 TAF15Q92804 592 aaKnown RBP eCLIP14.34□□□□□ -0.11
TOP3B-217ENST00000489581 POP5Q969H6 163 aaKnown RBP14.34□□□□□ -0.11
TOP3B-217ENST00000489581 CPPED1Q9BRF8 314 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms