RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 IGHV3-13P01766 116 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 MT-ND1P03886 318 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 ACADSP16219 412 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 MAKP20794 623 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 CCNOP22674 350 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 CDAP32320 146 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 GZMMP51124 257 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF81P51508 661 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 HSF2Q03933 536 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 NFYCQ13952 458 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 TSTQ16762 297 aaKnown RBP10.54□□□□□ -0.72
CPSF3-204ENST00000489403 PABPC1L2AQ5JQF8 200 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 C10orf128Q5T292 105 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 C1QL2Q7Z5L3 287 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 NKAIN4Q8IVV8 208 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF101Q8IZC7 436 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 TEX29Q8N6K0 151 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 OR4M2Q8NGB6 313 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 NABP1Q96AH0 204 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 LRMDAQ9H2I8 198 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 DECR2Q9NUI1 292 aa10.54□□□□□ -0.72
CPSF3-204ENST00000489403 TRIM77I1YAP6 450 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 ANGPT2O15123 496 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 SPRY3O43610 288 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 IGHV1-46P01743 117 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MT-ND5P03915 603 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 TSPAN19P0C672 248 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 ZNF32P17041 273 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 ADRA2CP18825 462 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 FUT1P19526 365 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 TNFRSF1BP20333 461 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 DRD4P21917 467 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 STOMP27105 288 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MPV17P39210 176 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 AQP2P41181 271 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 WNT5AP41221 380 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 DAP3P51398 398 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MMP15P51511 669 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MRPS34P82930 218 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MOGQ16653 247 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 VMACQ2NL98 169 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 HFEQ30201 348 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 SPATA46Q5T0L3 261 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 INTS11Q5TA45 600 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 DCAF12L2Q5VW00 463 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 CCDC80Q76M96 950 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 MOSPD2Q8NHP6 518 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 TMEM255BQ8WV15 326 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 IPCEF1Q8WWN9 437 aaPredicted RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 RASSF5Q8WWW0 418 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 STON2Q8WXE9 905 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 GCDHQ92947 438 aaPredicted RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 THOC1Q96FV9 657 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 SLC6A7Q99884 636 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 RBM4Q9BWF3 364 aaKnown RBP10.53□□□□□ -0.72
CPSF3-204ENST00000489403 SIAEQ9HAT2 523 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 CCNB1IP1Q9NPC3 277 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 ESM1Q9NQ30 184 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 INIPQ9NRY2 104 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 C20orf141Q9NUB4 165 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 UGT2A1Q9Y4X1 527 aa10.53□□□□□ -0.72
CPSF3-204ENST00000489403 LOC100509620A0A075B734 347 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 J3QLI3 93 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 WIPF1O43516 503 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 IGF2P01344 180 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 EGR1P18146 543 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 RBM34P42696 430 aaKnown RBP10.52□□□□□ -0.73
CPSF3-204ENST00000489403 FMODQ06828 376 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 ZNF718Q3SXZ3 478 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 TTMPQ5BVD1 217 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 THEM4Q5T1C6 240 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
CPSF3-204ENST00000489403 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 AKR7LQ8NHP1 331 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 SLC25A40Q8TBP6 338 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 TSPEARQ8WU66 669 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 TMEM239Q8WW34 195 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 DYDC1Q8WWB3 177 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 NSMAFQ92636 917 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 RAB1CQ92928 201 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 NMD3Q96D46 503 aaKnown RBP10.52□□□□□ -0.73
CPSF3-204ENST00000489403 ZMYND19Q96E35 227 aaPredicted RBP10.52□□□□□ -0.73
CPSF3-204ENST00000489403 SGTBQ96EQ0 304 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 ELMOD3Q96FG2 381 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 MARS2Q96GW9 593 aaKnown RBP10.52□□□□□ -0.73
CPSF3-204ENST00000489403 TIMD4Q96H15 378 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 JMJD8Q96S16 334 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 GAL3ST1Q99999 423 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 SUCNR1Q9BXA5 334 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 KCNN2Q9H2S1 579 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 NANOGQ9H9S0 305 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 SMURF2Q9HAU4 748 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 SH3GLB1Q9Y371 365 aa10.52□□□□□ -0.73
CPSF3-204ENST00000489403 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms