RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FAM27BQ5VT28 67 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 SLC16A14Q7RTX9 510 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 BIVMQ86UB2 503 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 DHFR2Q86XF0 187 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 LRRC18Q8N456 261 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 SLC7A6OSQ96CW6 309 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 DOK1Q99704 481 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 PLK3Q9H4B4 646 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 BARX1Q9HBU1 254 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 GRHPRQ9UBQ7 328 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 IL20RAQ9UHF4 553 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 FBXL3Q9UKT7 428 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
CTDSP1-209ENST00000488627 PRSS37A4D1T9 235 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 H7C1C5 153 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 AHCYL1O43865 530 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 TXNDC12O95881 172 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 SCG5P05408 212 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 IGFBP1P08833 259 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 FPR3P25089 353 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 GSSP48637 474 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 LCN6P62502 163 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 DAG1Q14118 895 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 RAB35Q15286 201 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 SLC36A2Q495M3 483 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 KRT80Q6KB66 452 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 C1orf94Q6P1W5 598 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 DPY19L2P2Q6ZN68 376 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 PAQR4Q8N4S7 273 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 OR10H5Q8NGA6 315 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 OR4C15Q8NGM1 316 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 ASB9Q96DX5 294 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 THTPAQ9BU02 230 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 MAGIXQ9H6Y5 334 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 RNF121Q9H920 327 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 PMF1-BGLAPU3KQ54 211 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 CSPG4Q6UVK1 2322 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 ZFHX3Q15911 3703 aa13.76□□□□□ -0.21
CTDSP1-209ENST00000488627 TEX13CA0A0J9YWL9 993 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 IMPA2O14732 288 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SSX4O60224 188 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 GPRIN2O60269 458 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 KRT36O76013 467 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 BMP4P12644 408 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SDHAP31040 664 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 GLRXP35754 106 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SGCAQ16586 387 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 RFX4Q33E94 735 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 ZNF770Q6IQ21 691 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 TMEM53Q6P2H8 277 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 PGBD2Q6P3X8 592 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 CPEB3Q8NE35 698 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SLC30A7Q8NEW0 376 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 RASD2Q96D21 266 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 KRCC1Q9NPI7 259 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 IER3IP1Q9Y5U9 82 aa13.75□□□□□ -0.21
CTDSP1-209ENST00000488627 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 OR10H3O60404 316 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 LY6G6DO95868 133 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 F12P00748 615 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 CCL2P13500 99 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 APEHP13798 732 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 CTLA4P16410 223 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 ZNF32P17041 273 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 LAP3P28838 519 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 CDKN2AP42771 156 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 EFNA4P52798 201 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 PSG4Q00888 419 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 TRAP1Q12931 704 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 KRR1Q13601 381 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 ENDOGQ14249 297 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 PABPC1L2AQ5JQF8 200 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 PTCHD4Q6ZW05 846 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 CCDC124Q96CT7 223 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 SORCS2Q96PQ0 1159 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 REG4Q9BYZ8 158 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 TRIM15Q9C019 465 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 NDEL1Q9GZM8 345 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 OR52D1Q9H346 318 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 VSX1Q9NZR4 365 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 TMCC3Q9ULS5 477 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 RTTNQ86VV8 2226 aa13.74□□□□□ -0.21
CTDSP1-209ENST00000488627 A0A096LNT2 108 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 TNFRSF11BO00300 401 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 XKRYO14609 159 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 LY6HO94772 140 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 SNAP29O95721 258 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 CST2P09228 141 aa13.73□□□□□ -0.21
CTDSP1-209ENST00000488627 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms