RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TM2D3Q9BRN9 247 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 NHEJ1Q9H9Q4 299 aaPredicted RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 RAB18Q9NP72 206 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 FARSBQ9NSD9 589 aaKnown RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 DDX19AQ9NUU7 478 aaKnown RBP1.18□□□□□ -2.22
SMC4-219ENST00000487747 KCNIP3Q9Y2W7 256 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 KIF3AQ9Y496 699 aa1.18□□□□□ -2.22
SMC4-219ENST00000487747 POLR1CO15160 346 aaPredicted RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 IFNB1P01574 187 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 UBTFL6P0CB48 400 aaPredicted RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 AK4P27144 223 aaPredicted RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 DUSP3P51452 185 aaPredicted RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 ADARB1P78563 741 aaKnown RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 DPYSL2Q16555 572 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 PDK4Q16654 411 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 SFT2D3Q587I9 215 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 TMEM123Q8N131 208 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 EMG1Q92979 244 aaKnown RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 SENP8Q96LD8 212 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 MTMR9Q96QG7 549 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 TPPP3Q9BW30 176 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 SLC25A2Q9BXI2 301 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 PARD6BQ9BYG5 372 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 RAB33BQ9H082 229 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 SAV1Q9H4B6 383 aaPredicted RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 FN3KRPQ9HA64 309 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 SGK2Q9HBY8 427 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 MRPL47Q9HD33 250 aaKnown RBP1.17□□□□□ -2.22
SMC4-219ENST00000487747 SLC35D1Q9NTN3 355 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 HPF1Q9NWY4 346 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 RNF14Q9UBS8 474 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 ATP10AO60312 1499 aa1.17□□□□□ -2.22
SMC4-219ENST00000487747 CACNA1GO43497 2377 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 OR5B21A6NL26 309 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 ARPC3O15145 178 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 SMPD2O60906 423 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 DIRAS1O95057 198 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 UTS2O95399 124 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 KRT13P13646 458 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 DCKP27707 260 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 RPL13AP40429 203 aaKnown RBP1.16□□□□□ -2.22
SMC4-219ENST00000487747 KRTAP12-1P59990 96 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 ELP6Q0PNE2 266 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 PRPSAP1Q14558 356 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 NADK2Q4G0N4 442 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 ECHDC2Q86YB7 292 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 CCDC50Q8IVM0 306 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 Q8NDZ9 215 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 GMCL1P1Q8NEA9 526 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 PYROXD1Q8WU10 500 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 RLN3Q8WXF3 142 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 COQ2Q96H96 371 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 MS4A4EQ96PG1 132 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 FAIM2Q9BWQ8 316 aa1.16□□□□□ -2.22
SMC4-219ENST00000487747 FRMD8P1Q9BZ68 369 aaPredicted RBP1.16□□□□□ -2.22
SMC4-219ENST00000487747 LIN28AQ9H9Z2 209 aaKnown RBP1.16□□□□□ -2.22
SMC4-219ENST00000487747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.16□□□□□ -2.224e-98■■■■■ 943.1
SMC4-219ENST00000487747 TSSC4Q9Y5U2 329 aaPredicted RBP1.16□□□□□ -2.22
SMC4-219ENST00000487747 METTL21EPA6NDL7 271 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 HLA-DQB1P01920 261 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 FGF1P05230 155 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 HSPA5P11021 654 aaKnown RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 ATP6V1C1P21283 382 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 GNA11P29992 359 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 CCR1P32246 355 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 HRH1P35367 487 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TGFBR2P37173 567 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 CEACAM6P40199 344 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 AQP2P41181 271 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 CDKN1BP46527 198 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 DGUOKQ16854 277 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TPD52L1Q16890 204 aaPredicted RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 FILIP1LQ4L180 1135 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TRIM40Q6P9F5 258 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TMEM179Q6ZVK1 233 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 PUSL1Q8N0Z8 303 aaKnown RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 ZNF557Q8N988 423 aaPredicted RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 MFSD9Q8NBP5 474 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 ZNF680Q8NEM1 530 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TRPV1Q8NER1 839 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 OR9A2Q8NGT5 310 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 TRMT10AQ8TBZ6 339 aaKnown RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 MAGEE2Q8TD90 523 aaPredicted RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 IKBKGQ9Y6K9 419 aa1.15□□□□□ -2.23
SMC4-219ENST00000487747 RPAP1Q9BWH6 1393 aaPredicted RBP1.15□□□□□ -2.23
SMC4-219ENST00000487747 NACADO15069 1562 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 MED7O43513 233 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 B3GALNT1O75752 331 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 CAPN1P07384 714 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 CT62P0C5K7 136 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 RPA2P15927 270 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 SLC2A5P22732 501 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 GRIA1P42261 906 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 YAP1P46937 504 aaKnown RBP1.14□□□□□ -2.23
SMC4-219ENST00000487747 ZNF138P52744 262 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 CDK16Q00536 496 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 KLHL38Q2WGJ6 581 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 HSP90AA5PQ58FG0 334 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 AP1ARQ63HQ0 302 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms